Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq4696 181 1e-40 seq1332 111 1e-19 >seq4696 Length=9412112 Score = 181 bits (200), Expect = 1e-40 Identities = 330/478 (69%), Gaps = 4/478 (1%) Strand=Plus/Plus Query 37918 TCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACAT 37977 || || | ||| |||||||| | ||| || | ||||| ||||| |||||| |||||| Sbjct 481907 TCATACTTTATGTATAATTTATCAAATTCTTCTCCCCAAACATCAGGTAATCCAGGACAT 481966 Query 37978 TCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCA 38037 || ||||||||||| | ||||| | || | || | | ||| || || || Sbjct 481967 TCATGTGGACACATTAAACTCCATTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCC 482026 Query 38038 GGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTT 38097 || | |||||| ||| || | ||| | | ||| | |||||| || ||| |||||| Sbjct 482027 GGGATCCATAAAGCATAGAAAAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTT 482086 Query 38098 CTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGC 38156 || || | ||||| ||||| || ||||| ||||| ||||| | ||| || | | || Sbjct 482087 -TTGAGATCGAGAAATTCGAAGATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGC 482145 Query 38157 TCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAA 38216 ||| ||||| || | || || |||| || || | | |||||||| |||| ||| | Sbjct 482146 TCCAGGTCTCTTGTTTCCACCTTGATCAACGTAACGCGCAGTGTTATTGTATACTCTAAT 482205 Query 38217 CATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCG 38276 |||||| |||| |||||||||| ||||||| | || || || |||||| | |||| Sbjct 482206 CATAGGAACTAAACCATTAGATACGCCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCT 482265 Query 38277 TATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGAT-ATTAAAGCGCATTGTT 38335 |||| | | ||| || || ||||| ||| | |||| | | |||||| ||| | Sbjct 482266 TATAGTGTGAACACTCAAACCAATGCCACCAGCA-GATTTGCTGACTAAAGCACATCTCT 482324 Query 38336 TTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACT 38393 | | |||||| | || ||||| |||||||| || | |||| || | |||||||| Sbjct 482325 TCAGTGTATCATAAATTCCTTCAATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 482382 Score = 116 bits (128), Expect = 3e-21 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 37401 TTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTAT 37460 |||||||| ||| ||||||| ||||| || ||||||| | || ||||||||||| | Sbjct 481228 TTTAGCTATTTCACAACTAGCTTCTAAAGCACCATAATACAAAGTCTCGAAAATTTGGGT 481287 Query 37461 ATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGC 37520 || | || || || ||||| || || |||| ||||| || ||||| ||| ||||||| Sbjct 481288 GTTCAGTAATTGAGCCTCTTCACTTTCAAATGGATAGCGCATTAATAAAAAGGCATCAGC 481347 Query 37521 CAAACCCTGAACACCGATACCTAT 37544 ||||||||||| ||| || ||||| Sbjct 481348 CAAACCCTGAATACCAATGCCTAT 481371 >seq1332 Length=421543 Score = 111 bits (122), Expect = 1e-19 Identities = 207/304 (68%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 37045 TGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTA 37104 |||||||||||||| | | ||| || || || |||| || ||| | |||||| Sbjct 277273 TGAATAGAACCATTGTTGGCAATTATTTCGTTTTTCATTTCATCATCCCAAAGATTTCTC 277214 Query 37105 CTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTT 37164 || ||| || | |||| |||||||| |||| | || ||||| || || || | | Sbjct 277213 TTTGTTAAATCATTTAATAAATGTGGATTAACAATCATGAATTCTCCTGACAAAACACGT 277154 Query 37165 CTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGAT 37224 || || || ||||| || || || || || | || ||||| || | ||||| |||| | Sbjct 277153 CTAGTGTAAATATTACTTGTGTAAGGCTCCACTGATTCATTGTTTCCCAATATCTGAGCT 277094 Query 37225 GTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATT 37284 ||||| || || ||||||||||| | || || ||| | | ||||| | ||| Sbjct 277093 GTAGAAGCTGTCGGCATTGGTGCAAGAAGTAGTGAATTACGAACTCCATACTTGGCTATT 277034 Query 37285 CTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATAT 37344 || ||||| | || ||||||||| || | ||||| || |||||||||||| Sbjct 277033 TTCAATTTTAATGCAGCCCAATCCCACAAGTTGGTTGGAGTCACATTCCACATATCATAC 276974 Query 37345 TGTA 37348 |||| Sbjct 276973 TGTA 276970 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 37324 TTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTC 37383 |||| ||||||| ||||| || | ||||| || |||| ||| | || || | Sbjct 276904 TTCTAGAACCACAAATCAT--TGACTTACTCCTTTGCTTACTGGTGAACCATTGTAAGAA 276847 Query 37384 TCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATT 37443 ||| ||||| | ||| || | ||| ||||||| ||||| || || |||||| | Sbjct 276846 AAATATGGTCCATTTTCTTTGGCCAATTCACAACTAGCTTCTAAAGCTCCAAAATATAAT 276787 Query 37444 GTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT 37503 |||||||||||||| ||||||| | || |||| || ||||||| |||| || | Sbjct 276786 GTTTCGAAAATTTGAATATTTAGCTGCTGAGCCTCTTTACTCTCGAATGGATAGTGCATT 276727 Query 37504 AATATAAACACATCAGCCAAACCCTGAACACCGATACCTA 37543 || | ||| | || ||||| || || || |||||||||| Sbjct 276726 AACAAAAAAGCGTCCGCCAATCCTTGTACCCCGATACCTA 276687 Score = 91.5 bits (100), Expect = 1e-13 Identities = 218/323 (67%), Gaps = 5/323 (2%) Strand=Plus/Minus Query 38083 TTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATA 38142 || || | ||| ||| |||| || || || || ||||| || ||||| || |||| | Sbjct 275906 TTACCAATATTTTTTTTTAAATCAAGGAATTCAAAAATATCTGCATGCCAGGGCTCTAGA 275847 Query 38143 TAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTA 38202 |||| | | ||| || || ||||| | || || ||| || | | | |||| || Sbjct 275846 TAAAGAGCAAATGCACCAGGCCTTTTGTTTCCACCTTGAC-AACAAAGCGTGCTGTATTG 275788 Query 38203 TTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAA 38262 || ||| ||| | ||||||||||| ||||| | ||||| ||| | || | Sbjct 275787 TTGAATACTCTGATCATAGGTACTAATCCATTTGCAAATCCGTTATTACTAGCAATCGCA 275728 Query 38263 GTACCCTTAGCTCGTATATTACTTATCGACAAT-CCTATTCCACCTGCATGTTTTGATAT 38321 || || ||||||| |||||| | | | || || || |||||||| | |||| || Sbjct 275727 GTTCCTTTAGCTCTAATATTA-TGAACACTTATACCAATACCACCTGCG-GATTTGCTAA 275670 Query 38322 TAAA-GCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTA 38380 ||| || ||| ||||| || || || || ||||||||||| || || | || | | Sbjct 275669 TAATTGCACATCTCTTTAATGTTTCGAAAATTCCTTCTATACTATCTTCAATCATGGTAA 275610 Query 38381 GTATAAAACAACTAGACATTTGA 38403 | |||||||| ||| |||| ||| Sbjct 275609 GAATAAAACAGCTAAACATGTGA 275587 Score = 89.7 bits (98), Expect = 5e-13 Identities = 123/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 37918 TCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACAT 37977 || || | ||| || | ||| ||||| |||| ||||| ||||| ||| | ||||||| Sbjct 276153 TCTTACTTTATGTACAGTTTATTAAATTCATCTCCCCAAACATCAGGTAAGCTTGGACAT 276094 Query 37978 TCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCA 38037 ||| ||||||||||| | ||||| |||| | ||| | || |||||||| ||| Sbjct 276093 TCGTGTGGACACATTAAACTCCATTTCTCATTGTCAAGTACTCTTTGCATAAATAGATCC 276034 Query 38038 GGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTA 38089 || | |||||| ||| ||| | || | | |||| ||||||| || |||| Sbjct 276033 GGGATCCATAAGGCATAAAACAGTTCCCTTGCTCTACATTCTTCCTTACCTA 275982 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/159 (73%), Gaps = 4/159 (3%) Strand=Plus/Minus Query 36863 TCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATAT--ATAT 36920 |||| || ||||||||||| || |||||| | |||||| ||| | |||| | || Sbjct 277534 TCCAGCCATAAAAATGCATGGAAGTAAGTTTTTCAGTTGTAGGTTTAGCCATATGAACAT 277475 Query 36921 TGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACA 36980 | || ||||| ||| || || || || |||| || || |||| || ||||||| Sbjct 277474 TTACA--GATTGTGATTGGTCAATGAAAGCGCCTCGATCTGCAGCCACTTTTAAAATAAT 277417 Query 36981 TTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTT 37019 ||| |||| ||||||||| || |||||||||| || ||| Sbjct 277416 TTTCTGAGGTATCTCCCATACTGTTTTATATAATTCTTT 277378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468496032577280