Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq4696 176 6e-39 seq1332 122 1e-22 seq4429 84.2 3e-11 >seq4696 Length=9412112 Score = 176 bits (194), Expect = 6e-39 Identities = 314/456 (69%), Gaps = 2/456 (0%) Strand=Plus/Plus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 || || || ||||||||||||| |||||||||||||||| |||||||| || | Sbjct 481928 TCAAATTCTTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACACATTAAACTC 481987 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 66100 || | | ||| || |||| ||||| || | || || ||||| | ||| ||| || Sbjct 481988 CATTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAAGC-ATAGAA 482046 Query 66101 TAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 66160 | ||||| | ||| | ||| || || ||||| |||||||| |||||||| || | | Sbjct 482047 AAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAGAAATTCGAA 482106 Query 66161 AATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 66220 || ||| ||||||||||||||| || ||||| | ||||||| | |||||||| || Sbjct 482107 GATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACC 482166 Query 66221 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 66280 ||||| | ||| | || |||||||| || ||||| | ||| |||| | |||||| || Sbjct 482167 TTGATCAACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGA 482226 Query 66281 TGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACC 66340 | || || || || || || | ||| | || | ||| | || | ||| Sbjct 482227 TACGCCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAACC 482286 Query 66341 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 66400 || || || || ||| || ||| || |||| || | |||||||| || || || Sbjct 482287 AATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATAAATTCCTTC 482346 Query 66401 TATACTATCATCCATCATGTTAAGTAGAAAACAGCT 66436 ||||| || || |||| |||| || ||||| || Sbjct 482347 AATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 482382 Score = 152 bits (168), Expect = 7e-32 Identities = 270/391 (69%), Gaps = 7/391 (2%) Strand=Plus/Plus Query 64953 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 65012 ||||| || | ||| | ||| ||| ||||| |||||||| || | || ||||||||| Sbjct 480659 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 480718 Query 65013 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 65072 || | || |||||||| | ||| ||||| | ||||| || | | ||| | || || Sbjct 480719 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCC 480778 Query 65073 GGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 65129 |||| ||| | ||||||| || || | ||| || || |||||| ||||| Sbjct 480779 GGAATCCTTGCAAGGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 480838 Query 65130 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 65189 || | ||| | | || || || ||| || | | | ||| ||||| || ||||| ||| Sbjct 480839 TCGTCCCACAGATCCCTGTCTGTCAAATCTTTCAACAAATGAGGATTGACGACTTGGAAT 480898 Query 65190 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 65249 |||||||| | || | || |||||||| || || || || || || | || || || Sbjct 480899 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 480958 Query 65250 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 65309 || ||||||||||| || || || || || ||||| || || | || ||| ||| | | Sbjct 480959 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 481018 Query 65310 AGACCGTATGTTCTG--ATTTTATCTTTTAG 65338 | || |||||||| |||||| |||| || Sbjct 481019 ACGCC--ATGTTCTGCAATTTTAGCTTTCAG 481047 Score = 107 bits (118), Expect = 3e-18 Identities = 231/345 (67%), Gaps = 8/345 (2%) Strand=Plus/Plus Query 65580 ATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTA 65639 ||||| || || || || ||| | || || |||| |||||||| || || || ||||| Sbjct 481443 ATACCAATGGGCCTGTGCCTCGTGTTGGACCTTTCTGCTTCTGGGATGGGGTAGTAATTT 481502 Query 65640 ATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGA 65699 | || |||||||||| | |||||| | ||||| || || ||||| ||||| | Sbjct 481503 AGGTCAATAATTTTATCCAAATTTCTTGTTGTGACTTTTACGACTTCCTTAAGTTTTGCA 481562 Query 65700 AAATCAAATCGCTCATCTA-------TTACAAACATGTTCAATGCAACAGATGCCAGATT 65752 ||||| | || | | || |||||||||| || | |||| |||||| | ||| Sbjct 481563 AAATCGTA-CGTTTTTTTACTGGTATTTACAAACATATTAACGGCAATAGATGCTAAATT 481621 Query 65753 ACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACA 65812 || |||||||| || | | | | ||| || | | || ||||| | |||||| | Sbjct 481622 GCACACGGCTACTTCGTCTGGAGAAGAATACTGCACAACTTCCGTGCATAAATTACTGCT 481681 Query 65813 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 65872 |||| || || | ||||||||||| || ||||| ||| || || | || Sbjct 481682 TCTGATAGTACCAAGGTTTTGTTGATTGGATTTGCGATTACAGTGATCTTTGTATAACAT 481741 Query 65873 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 65917 | | || || |||||||||| ||||| || ||| || |||| Sbjct 481742 GTAAGGGGTTCCAGTTTCAACTTGAGACATTAAAATAGCAGTCCA 481786 >seq1332 Length=421543 Score = 122 bits (134), Expect = 1e-22 Identities = 133/174 (76%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 65118 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 65177 || || || ||||||| ||| | ||||||| |||||| | | | | ||| |||||| Sbjct 277243 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277184 Query 65178 ACTA-CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTC 65236 || | | |||| |||||| ||||| || | | ||||||||||||||| || || || || Sbjct 277183 ACAATCATGAA-TTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTC 277125 Query 65237 CACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 65290 ||| || ||||| |||||||| || ||||| || || || |||||||| ||||| Sbjct 277124 CACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTCGGCATTGGTGC 277071 Score = 107 bits (118), Expect = 3e-18 Identities = 201/296 (68%), Gaps = 6/296 (2%) Strand=Plus/Minus Query 65628 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 65687 ||||||| ||| | ||| |||||||||| | ||| | ||| ||| || || || Sbjct 276566 GGATAATGATTCAGATCAATAATTTTATCTAAATTCTTAGCAACAGTTTTAACAACTTCT 276507 Query 65688 TTCAGTTTGAGAAAATCAAATCGCT------CATCTATTACAAACATGTTCAATGCAACA 65741 |||| ||| | ||||| | || || | |||||||| || | |||| Sbjct 276506 TTCAATTTTAAAAAATTGTAGTACTGTGTTTCAACATCAACAAACATATTAACAGCAATG 276447 Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 65801 ||||| | |||||| || ||||| ||||| | | | |||||||| || |||||||| Sbjct 276446 GATGCTAAATTACATACTGCTACTTCATTTGGAGAAGAGTATTGTATAATTTCAGTGCAT 276387 Query 65802 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 65861 | |||||| | || || ||||| | |||||||||||| || || || | ||| Sbjct 276386 AAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATTTGATTTAAGATTGCAGGGATCT 276327 Query 65862 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 65917 ||||| || || | ||||| |||||||||| || | || || ||| || |||| Sbjct 276326 TTATAGAGCATATAAGGAGTTCCAGTTTCAACTTGTGCTTTTAAAATTGCAGTCCA 276271 >seq4429 Length=4547816 Score = 84.2 bits (92), Expect = 3e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 36428 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 36487 || || ||||| | ||| |||||||| || ||||||||||||||||||| || || Sbjct 2612779 TAGGTGTCAATGAGAAGGGAGTACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAG 2612720 Query 36488 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTT 36547 || ||||| || | |||||| || | ||| ||||| | || || || | | ||| Sbjct 2612719 CCATAGAAGCAACGAGCCTCAGTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTC 2612660 Query 36548 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 36591 ||||| || || || || ||| || || || ||||| ||||| Sbjct 2612659 TCATTGACAATACCATCTGAGGCAGCGAAGAATGCCAAAACATG 2612616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658132388190080