Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq4270 113 3e-20 seq3620 93.3 3e-14 seq2005 91.5 1e-13 >seq4270 Length=22512 Score = 113 bits (124), Expect = 3e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 42931 TTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGT 42990 ||||||||||| ||||| || | || || || |||||||| |||||||||||||||||| Sbjct 4622 TTGTAATCGGATAATGTTCGACCATCCTCTAACTGTTTGCCAGCAAAAATCAATCGCTGT 4681 Query 42991 TGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCG 43050 ||||| | || | |||||| || || ||| |||| || | | | || || Sbjct 4682 TGATCTGGAGGAATACCTTCCTTATCTTGGATTTTAGCTTTAACATTTTCTATAGTATCT 4741 Query 43051 CCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 ||| ||||| |||| ||||| || || || || | |||||| ||||||||||||||| Sbjct 4742 GAAGCTTCGACCTCTAAAGTTATGGTCTTGCCTGTCAAAGTTTTGACAAAAATTTGCATT 4801 >seq3620 Length=288302 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 |||||||| | ||||| || |||||||| ||| | || || | ||| || || |||||| Sbjct 89770 TCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCGAGTTGCTTACCAGCAAAA 89711 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 |||| | ||| ||||| | || | ||||||||| || ||| | ||||| | Sbjct 89710 ATCAGCCTCTGCTGATCTGGGGGAATACCTTCTTTGTCTTGAATCTTAGCCTTGACATTC 89651 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| || || ||| ||||| || | || || ||||| || || || || || ||| Sbjct 89650 TCAATCGTATCAGAAGCTTCGACTTCCAGAGTAATTGTTTTGCCAGTAAGCGTCTTAACA 89591 Query 43099 AAAATTTGCAT 43109 ||||||||||| Sbjct 89590 AAAATTTGCAT 89580 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||| || |||||||| | |||| ||| || || | ||||||||||||| |||||| Sbjct 90481 AGTCTCAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGT 90422 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || || | ||| || || || || || || ||||| ||||| | || | |||||| Sbjct 90421 CCATCTTCGAGTTGCTTTCCAGCGAAGATTAAACGCTGCTGATCTGGAGGAATACCTTCC 90362 Query 43012 TTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTT 43071 || || ||| | ||||| | | | |||||| ||||| || || | || Sbjct 90361 TTATCTTGGATTTTGGCCTTGACATTCTCGATCGTGTCGGATGCCTCAACCTCAAGGGTG 90302 Query 43072 ATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || ||||| | || || || || || ||||| Sbjct 90301 ATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90264 >seq2005 Length=1592806 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||| || | || || | ||| | ||| |||||| || | |||||| || || Sbjct 904815 CCTCCACGGAGGCGCAAGACTAGATGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAA 904756 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | |||||| | || || |||||||| || ||||| || | ||||| ||||| | || Sbjct 904755 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 904696 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | || ||||| || ||| ||||||| | ||| ||||| ||||| || Sbjct 904695 ATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCCACT 904636 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 || | || || ||||| || || | ||||||||||| || ||||| || Sbjct 904635 TCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCATCTT 904586 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 |||||| || || | | || | ||||| ||| || ||||| | |||||||| || Sbjct 905500 GCCTCCTCGAAGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCAGA 905441 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || || | | | || |||| ||| || || || ||||||| ||||||||||| | || Sbjct 905440 CAGGGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGTGG 905381 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | ||||||||| || ||| |||| || | ||| || || || || || Sbjct 905380 GATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTATCTGATGCTTCAAC 905321 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || ||||| || || |||||||| |||||||||||||| Sbjct 905320 CTCCAGAGTGATGGTTTTACCAGTCAGAGTTTTTACAAAAATTTGCAT 905273 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 ||||| | ||| | | |||| ||||| ||| ||| ||||| | ||||| || || Sbjct 906183 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906124 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | | || |||| ||||| |||||||| || | ||||| || || | || Sbjct 906123 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906064 Query 43003 ACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | ||||| || || |||| | ||||||| | | | |||||| ||| || || Sbjct 906063 ATGCCTTCCTTATC-CTGAATTTTAGCTTTGACGTTTTCGATAGTGTCGGAAGCTTCAAC 906005 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 |||| ||||| ||||| ||||||| ||||| || |||||||||||| Sbjct 906004 TTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATTTGCATT 905956 Score = 82.4 bits (90), Expect = 6e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | ||||| || || | ||||| |||| || |||||||| || ||||| Sbjct 905920 CTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGCCCGTCTTCTAATTGTTTACCAGCAAA 905861 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTC 43036 || | ||||| || || | || | |||||||| || |||| | |||| || Sbjct 905860 GATAAGACGCTGCTGGTCTGGAGGAATTCCTTCTTTGTC-CTGAATTTTGGCTTTAACAT 905802 Query 43037 TGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCA 43096 | ||| |||||| ||||| || || | || || || || || || |||||||| | Sbjct 905801 TTTCAATGGTGTCGGAGGCCTCTACTTCCAGAGTAATGGTCTTGCCAGTCAGAGTTTTGA 905742 Query 43097 CAAAAATTTGCATT 43110 | |||||||||||| Sbjct 905741 CGAAAATTTGCATT 905728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381346769308896