Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4696 192 8e-44 seq1332 129 8e-25 seq4429 87.8 2e-12 >seq4696 Length=9412112 Score = 192 bits (212), Expect = 8e-44 Identities = 323/465 (69%), Gaps = 2/465 (0%) Strand=Plus/Plus Query 71935 TATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACAC 71994 |||||| || || || ||||||||| ||| ||||||||||||||||| |||||| Sbjct 481919 TATAATTTATCAAATTCTTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACAC 481978 Query 71995 ATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 72054 || || ||| | | || ||| |||| ||||| || | || || ||||| | | Sbjct 481979 ATTAAACTCCATTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAA 482038 Query 72055 GCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 72113 || ||| || || ||||| | ||| | || || || ||||| |||||||| |||||||| Sbjct 482039 GC-ATAGAAAAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAG 482097 Query 72114 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTT 72173 || | | || |||| ||||||||||||||| || ||||| | |||| || | || Sbjct 482098 AAATTCGAAGATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTT 482157 Query 72174 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 72233 |||||| || ||||| | ||| | || |||||||| || ||||| | ||| |||| | Sbjct 482158 GTTTCCACCTTGATCAACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAA 482217 Query 72234 ACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAAT 72293 |||||| ||| | || || || || || || | ||| |||| | ||| || || Sbjct 482218 ACCATTAGATACGCCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAAC 482277 Query 72294 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 72353 | ||| || || || || ||| || ||| || |||| || | |||||||| Sbjct 482278 ACTCAAACCAATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATA 482337 Query 72354 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 72398 || || || ||||| || || |||| |||| || ||||| || Sbjct 482338 AATTCCTTCAATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 482382 Score = 145 bits (160), Expect = 1e-29 Identities = 266/389 (68%), Gaps = 3/389 (1%) Strand=Plus/Plus Query 70915 GCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 70974 |||||||| | ||| | |||||| ||||| |||||||| || | || ||||||||| Sbjct 480659 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 480718 Query 70975 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 71034 || | || |||||||| | ||| ||||| | ||||| || | | ||| | || || Sbjct 480719 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCC 480778 Query 71035 GGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCT 71091 |||| ||| | ||||||| || || | ||| || || ||| || ||||| Sbjct 480779 GGAATCCTTGCAAGGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 480838 Query 71092 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAAT 71151 || | ||| | | || || || ||| || | | | ||||||||| || ||||| ||| Sbjct 480839 TCGTCCCACAGATCCCTGTCTGTCAAATCTTTCAACAAATGAGGATTGACGACTTGGAAT 480898 Query 71152 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTA 71211 |||||||| | || | | |||||||| || || || || || || | || || || Sbjct 480899 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 480958 Query 71212 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTA 71271 || ||||||||||| || || || || || ||||| || || | || | | ||| | | Sbjct 480959 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 481018 Query 71272 AGACCATGTGATCGGATTTTATCTTTTAG 71300 | |||||| | |||||| |||| || Sbjct 481019 ACGCCATGTTCTGCAATTTTAGCTTTCAG 481047 >seq1332 Length=421543 Score = 129 bits (142), Expect = 8e-25 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 71049 CTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCT 71108 |||||| || ||| | ||||| || ||||| || || |||| ||| | ||||| Sbjct 277274 CTGAATAGAACCATTGTTGGCAATTATTTCGTTTTTCATTTCATCATCCCAAAGATTTCT 277215 Query 71109 CTCGGTTAAAACTCTAAGGAGATGAGGATTAACTA-CTTGAAATTCTCCAGACAATACTC 71167 || |||||| | | | | ||| |||||||| | | |||| |||||| ||||| || | Sbjct 277214 CTTTGTTAAATCATTTAATAAATGTGGATTAACAATCATGAA-TTCTCCTGACAAAACAC 277156 Query 71168 TACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAG 71227 | ||||||||||||||| || || || |||||||| ||||| |||||||| || |||| Sbjct 277155 GTCTAGTGTAAATATTACTTGTGTAAGGCTCCACTGATTCATTGTTTCCCAATATCTGAG 277096 Query 71228 CAGTTGATGCAGTCGGCATAGGTGC 71252 | || || || |||||||| ||||| Sbjct 277095 CTGTAGAAGCTGTCGGCATTGGTGC 277071 Score = 113 bits (124), Expect = 6e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 71683 ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA 71742 ||||||| || | |||| ||||| | |||||| || ||||| ||||| | | | Sbjct 276467 ACAAACATATTAACAGCAATGGATGCTAAATTACATACTGCTACTTCATTTGGAGAAGAG 276408 Query 71743 TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 71802 |||||||||||||||||||| | |||||| | || || ||||| | |||||||||||| Sbjct 276407 TATTGTATAATTTCAGTGCATAAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATTT 276348 Query 71803 CTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 71862 || || || | ||| ||||| || ||| | ||||| |||||||||| || | | Sbjct 276347 GATTTAAGATTGCAGGGATCTTTATAGAGCATATAAGGAGTTCCAGTTTCAACTTGTGCT 276288 Query 71863 TCTATAATCGCTTTCCA 71879 | || ||| || |||| Sbjct 276287 TTTAAAATTGCAGTCCA 276271 Score = 86.0 bits (94), Expect = 8e-12 Identities = 195/288 (68%), Gaps = 4/288 (1%) Strand=Plus/Minus Query 72397 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 72456 || |||||||| || | |||| | ||| | | | |||||||| || || || || Sbjct 275510 CTGGACATTTGTTGGTGTATAGTACATGCAAAAGAAAGTGTAGGAGATGCATGTGTGAAG 275451 Query 72457 CATTTTTCAGACAGTAGA-TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTAT 72515 | |||||| |||| | || || ||||| || || ||| | |||| || ||| | Sbjct 275450 TAACGTTCAGA-AGTATAATTATATGTCTCTATGACTTTTTCAAGATCCTCTTTATGAAC 275392 Query 72516 TCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTT-ATTTATTT 72574 |||| || || | ||| | ||||| || |||| ||||| | ||||| ||| || Sbjct 275391 AGCTACTGCAACTCTCATAAGCATATCTTGTGGTCACTCAACAA-CTTGTCCATTAATCC 275333 Query 72575 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 72634 | || ||||| ||| ||||| |||||||| ||||||||||| | ||| ||| | Sbjct 275332 TGAATAAGTAACTTTTCTCCAAGGTTTTAAATCCAAAATAGTTAAAGACAAAATCTTTGT 275273 Query 72635 CGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATAT 72682 | || || | ||||| ||| |||| |||| ||| | || ||||| Sbjct 275272 CATAGTCTATGGCAGAATTTAGTCTATCTTTATGTTTTTGAATTATAT 275225 Score = 86.0 bits (94), Expect = 8e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 71392 TATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTT 71451 |||||||| | || || ||| | ||||||||| || ||||| |||||| |||| | ||| Sbjct 276843 TATGGTCCATTTTCTTTGGCCAATTCACAACTAGCTTCTAAAGCTCCAAAATATAATGTT 276784 Query 71452 TCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGA 71511 |||||||| | |||| || | || || || || || |||||||| | | | Sbjct 276783 TCGAAAATTTGAATATTTAGCTGCTGAGCCTCTTTACTCTCGAATGGATAGTGCATTAAC 276724 Query 71512 ATAAACGCGTCTGCTAATCCTTGAACGCCAATACC 71546 | ||| ||||| || |||||||| || || ||||| Sbjct 276723 AAAAAAGCGTCCGCCAATCCTTGTACCCCGATACC 276689 >seq4429 Length=4547816 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415 |||||||| || ||||||||||||||||||| ||| || || ||||| || | ||||| Sbjct 2612758 TACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAGCCATAGAAGCAACGAGCCTCA 2612699 Query 42416 GTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTG 42475 || ||||| ||||| | || || ||| | | ||| || || || || || || | Sbjct 2612698 GTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTCTCATTGACAATACCATCTGAG 2612639 Query 42476 GCTGCAAAAAACGCCAATACATG 42498 || || || || ||||| ||||| Sbjct 2612638 GCAGCGAAGAATGCCAAAACATG 2612616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671097992053120