Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq2005 113 4e-20 >seq2005 Length=1592806 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872 ||||||||| || | | |||| || | ||| ||||| |||||||| ||||| || | Sbjct 906185 TTCCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTG 906126 Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932 | || | | ||||||||||||||||| ||| | || || | |||||| || | Sbjct 906125 AAAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTG 906066 Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992 | | ||| || || || |||||| ||| || | ||| ||| ||| || || Sbjct 906065 GGATGCCTTCCTTATCCTGAATTTTAGCTTTGACGTTTTCGATAGTGTCGGAAGCTTCAA 906006 Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 ||| | ||| ||||||||||| ||||| |||||||| |||||||||||| Sbjct 906005 CTTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATTTGCATT 905956 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872 ||||||| || | | || |||| || || || ||||||||||| || ||||| || | Sbjct 906413 TTCCTCCGCGAAGACGCAAGACCAAATGTAAGGTGGACTCCTTTTGGATGTTGTAGTCTG 906354 Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932 | || | | ||||||||||||||||| ||| | || || | |||||| || | Sbjct 906353 AAAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTG 906294 Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992 | | ||| || || || |||||| ||| || | ||| ||| ||| || || Sbjct 906293 GGATGCCTTCCTTATCCTGAATTTTAGCTTTGACGTTTTCGATAGTGTCGGAAGCTTCAA 906234 Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 ||| | ||| ||||||||||| ||||| |||||||| ||||| |||||| Sbjct 906233 CTTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCATT 906184 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 || || || ||||| || |||||||| | || ||| || | || ||||| |||||||| Sbjct 905697 GTTGATTCTTTTTGGATGTTGTAATCAGACAGGGTTCTGCCATCTTCCAGTTGTTTACCA 905638 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| | || || | || || || || | ||| |||||||| ||| || ||| Sbjct 905637 GCAAATATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTGAATCTTGGCTTTG 905578 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | ||| |||||| || ||| ||| | |||||||| || || || |||||| Sbjct 905577 ACATTTTCGATAGTATCAGAAGCCTCTACTTCCAAAGTAATGGTCTTTCCAGTCAAAGTT 905518 Query 19025 TTGACAAAAATTTGCAT 19041 ||||||||||||||||| Sbjct 905517 TTGACAAAAATTTGCAT 905501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414547981599328