Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq2005 93.3 3e-14 seq3620 87.8 1e-12 >seq2005 Length=1592806 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 |||||||||| | | |||| ||| |||||| |||||||||||| || || || | Sbjct 906183 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTC-TGA 906125 Query 43955 AATTGACGCTC-ATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | | || ||| |||| ||||| || ||||| || | || |||||||| | || Sbjct 906124 AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGG 906065 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||| ||||| |||||| |||||| | | | ||| || | | || || Sbjct 906064 GATGCCTTCCTTATCCTGAATTTTAGCTTTGACGTTTTCGATAGTGTCGGAAGCTTCAAC 906005 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || |||||||||||||| || || || || |||||||| Sbjct 906004 TTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 905957 >seq3620 Length=288302 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||| | | || || |||||||| |||||| |||||||| || ||||| || Sbjct 90035 ACCTCCACGAAGTCGCAATACCAAATGCAGCGTGGATTCTTTTTGTATGTTATAGTCTGA 89976 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| ||| |||| || ||||||||||| || || ||||||| |||||||| | || Sbjct 89975 CAATGTGCGCCCATCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGTGG 89916 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || ||||| || |||||| || || | | | || || | | ||| || Sbjct 89915 GATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAAGCCTCGAC 89856 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || |||||||| || | ||||| || || || ||||| Sbjct 89855 TTCAAGTGTGATGGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCAT 89808 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| ||||| || || || |||||||||||||| || ||| | ||| |||| Sbjct 91844 TAAGACCAAGTGGAGTGTAGATTCTTTTTGAATATTGTAGTCGGAGAGCGTACGACCATC 91785 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 |||||||||||||| ||||| || || || |||||||| |||| | || ||||| || Sbjct 91784 TTCCAATTGTTTTCCGGCAAAGATTAAACGCTGCTGGTCTGGAGGGATTCCCTCTTTGTC 91725 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 ||||| ||||| | | | ||||| | | ||| || || | || || || Sbjct 91724 CTGGATTTTAGCCTTGACATTTTCGATCGTATCAGAGGCCTCGACTTCAAGTGTGATGGT 91665 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || || || ||||| || || || ||||| Sbjct 91664 TTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 91632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354756361238976