Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq2005 111 1e-19 seq3620 91.5 1e-13 seq4270 86.0 5e-12 >seq2005 Length=1592806 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064 ||| ||||| ||||||||||| ||||||||||| || ||| | |||||||| ||| Sbjct 905704 ATGGAGTGTTGATTCTTTTTGGATGTTGTAATCAGACAGGGTTCTGCCATCTTCCAGTTG 905645 Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124 ||| || ||| | || || | ||||| || || | |||||||||||| ||| || Sbjct 905644 TTTACCAGCAAATATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTGAATCTT 905585 Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184 ||| || | | | || ||| || || ||||| |||||||| || || || Sbjct 905584 GGCTTTGACATTTTCGATAGTATCAGAAGCCTCTACTTCCAAAGTAATGGTCTTTCCAGT 905525 Query 20185 CAACGTTTTGACAAAAATTTGCAT 20208 ||| |||||||||||||||||||| Sbjct 905524 CAAAGTTTTGACAAAAATTTGCAT 905501 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||||| || | || ||||| || || ||||| |||||||| || |||||||| Sbjct 905045 TTCCTCCTCTTAGACGCAGGACCAAGTGAAGAGTAGACTCTTTTTGAATATTGTAATCAG 904986 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| |||||||| |||||||| ||| | ||||| | |||||| || | Sbjct 904985 AAAGAGTACGTCCATCTTCCAGCTGTTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAG 904926 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||||||||| || || ||| || | ||| | || || ||| Sbjct 904925 GAATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATTGTGTCTGAAGCTTCAA 904866 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 |||| ||||||||| || || ||||| ||||| ||||| ||||||||| Sbjct 904865 CCTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTAACAAAGATTTGCATT 904816 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 |||||||| | | | || | ||| || || ||||||||||| ||||||||||| | Sbjct 905499 CCTCCTCGAAGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCAGAC 905440 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||||| ||| || || || |||| || | ||||||||| || Sbjct 905439 AGGGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGTGGG 905380 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| ||||| ||| || | ||| | ||| | ||| Sbjct 905379 ATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTATCTGATGCTTCAACC 905320 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || |||||||| || |||| ||||| |||||||||||||| Sbjct 905319 TCCAGAGTGATGGTTTTACCAGTCAGAGTTTTTACAAAAATTTGCAT 905273 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||| ||| || || || |||||||| |||||||| || | || | ||| ||| Sbjct 906165 ACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAAAGGGTCCTTCCATCCTCC 906106 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | ||||| || ||| | || || | ||| || || || | |||||| || || | Sbjct 906105 AGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTATCCTGA 906046 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| ||| || | | | || ||| || ||| ||| | ||| |||||||| Sbjct 906045 ATTTTAGCTTTGACGTTTTCGATAGTGTCGGAAGCTTCAACTTCTAAGGTTATGGTTTTA 905986 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| || |||||||| |||||||||||| Sbjct 905985 CCGGTTAAGGTTTTGACGAAAATTTGCATT 905956 >seq3620 Length=288302 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20006 TGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGT 20065 || ||||| ||||| ||||| |||||||| || || || |||||| | ||| Sbjct 89782 TGAAGTGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCGAGTTGC 89723 Query 20066 TTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTT 20125 || || ||| |||| |||||||| ||||| ||| | ||||||||||| ||| || Sbjct 89722 TTACCAGCAAAAATCAGCCTCTGCTGATCTGGGGGAATACCTTCTTTGTCTTGAATCTTA 89663 Query 20126 TGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTC 20185 || || | ||| | ||| || ||| ||||| ||||| |||||||| || Sbjct 89662 GCCTTGACATTCTCAATCGTATCAGAAGCTTCGACTTCCAGAGTAATTGTTTTGCCAGTA 89603 Query 20186 AACGTTTTGACAAAAATTTGCAT 20208 | ||| || |||||||||||||| Sbjct 89602 AGCGTCTTAACAAAAATTTGCAT 89580 >seq4270 Length=22512 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 20019 CTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCTTCCAATTGTTTGCCCGCATA 20076 |||| ||||||||||||||| ||| | || || ||| || || |||||||| ||| | Sbjct 4611 CTTTCTGTATGTTGTAATCGG--ATAATGTTCGACCATCCTCTAACTGTTTGCCAGCAAA 4668 Query 20077 AATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTG 20136 ||| | | ||||||||| || | ||||| || || ||||| ||| || | Sbjct 4669 AATCAATCGCTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATTTTAGCTTTAACATT 4728 Query 20137 GCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGAC 20196 | | || ||| || ||| || | || ||||| ||||| ||||| |||||||| Sbjct 4729 TTCTATAGTATCTGAAGCTTCGACCTCTAAAGTTATGGTCTTGCCTGTCAAAGTTTTGAC 4788 Query 20197 AAAAATTTGCATT 20209 ||||||||||||| Sbjct 4789 AAAAATTTGCATT 4801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419562081412272