Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq2005 89.7 4e-13 seq3620 86.0 5e-12 >seq2005 Length=1592806 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/232 (70%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 |||||||| | | || || ||||| | ||| ||||||||| |||||||| || | Sbjct 906411 CCTCCGCGAAGACGCAAGACCAAATGTAAGGTGGACTCCTTTTGGATGTTGTAGTCTGA- 906353 Query 48560 AATTGTCGCTCG-TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || ||| || ||||||||||| |||||| | | || | ||||||||| || || Sbjct 906352 AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGG 906293 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCT----ATGGTATCGGTAGACT 48674 | | |||||| ||| |||||| |||| |||| | || || |||| || | Sbjct 906292 GATGCCTTCCTTATCCTGAATTTTA-GCTTT---GACGTTTTCGATAGTGTCGGAAGCTT 906237 Query 48675 CCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | || | ||||||||||||||||| | ||||| || ||||||||||| Sbjct 906236 CAACTTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906185 >seq3620 Length=288302 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||||||| ||||||||||||||||| |||| |||| || | || || || ||| Sbjct 89782 TGAAGTGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCGAGTTGC 89723 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 ||||| | |||| | | ||||||||| || | || ||| ||||| ||| || Sbjct 89722 TTACCAGCAAAAATCAGCCTCTGCTGATCTGGGGGAATACCTTCTTTGTCTTGAATCTTA 89663 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC-TCGACTGTTATGGTTTTACCGGT 48702 ||||| | | | || ||||| | || || || | || | || || ||||| || || Sbjct 89662 GCCTTGACATTCTCAATCGTATCAGAAG-CTTCGACTTCCAGAGTAATTGTTTTGCCAGT 89604 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 || || || |||||||| ||||| Sbjct 89603 AAGCGTCTTAACAAAAATTTGCAT 89580 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571 || || || |||||||| ||| ||| || |||||||||||||| | || || | Sbjct 90478 CTCAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGTCCA 90419 Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 || || || ||||| || || | ||||||||||||||||| || | || |||||| Sbjct 90418 TCTTCGAGTTGCTTTCCAGCGAAGATTAAACGCTGCTGATCTGGAGGAATACCTTCCTTA 90359 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 || ||||| ||||| | | | || || |||| | ||| ||| | || ||| Sbjct 90358 TCTTGGATTTTGGCCTTGACATTCTCGATCGTGTCGGATGCCTCAACCTCAAGGGTGATG 90299 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || ||||| | || || || || |||||||| Sbjct 90298 GTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90264 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTC 48576 ||||| ||||| || ||| || || ||||| ||||||| || | || || | ||||| Sbjct 90244 ACTAAGTGAAGAGTAGACTCTTTCTGTATGTTATAATCAGACAGAGTG-CGTCCATCCTC 90186 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| ||| || |||| ||||||||||| ||| || | || ||||||||| Sbjct 90185 AAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTG 90126 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||| | | | ||||| |||| | || |||| || || || || Sbjct 90125 GATCTTAGCCTTTACGTTCTCGATGGTGTCGGACGCTTCAACTTCGAGGGTAATAGTCTT 90066 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| || ||||| || || || || ||||| Sbjct 90065 ACCAGTCAGAGTCTTTACGAAGATTTGCAT 90036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421225981796912