Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq1585 257 9e-64 seq4679 102 5e-17 >seq1585 Length=5232781 Score = 257 bits (284), Expect = 9e-64 Identities = 503/733 (69%), Gaps = 13/733 (2%) Strand=Plus/Minus Query 3410 TTTTGTGATAAAAATATTGTACATAATATATTGCATTTCAAATCTATCTTCGACAATATC 3469 ||||||||| ||| | || | ||||| | ||| ||||| | || || | | Sbjct 3986421 TTTTGTGATGAAATCGTGGTTAAAAATATCATTAATTCTAAATCAGTGTTTGATAGACTT 3986362 Query 3470 GATaaaaaaaaaTTATGTGACGCCAGGGCAAGATCCAACCCATTCGAATTAGTGGGCAAA 3529 || ||||| || | | || || || || | || || |||| ||| | | |||| Sbjct 3986361 GACAAAAATGAAATGCGAGAAGCAAGAACACGTTCTAATCCATATGAAACAATTCGCAAT 3986302 Query 3530 GCtttttttATCAACAGAGGTGCTGTAAAAATGGCAAACATTGATCATGCAACGAATTTC 3589 | ||||| ||||||||| |||||| |||||||| ||||||||| | || |||||| Sbjct 3986301 TCAATTTTTCTCAACAGAGCTGCTGTTAAAATGGCCAACATTGATAAAGCTTGTAATTTC 3986242 Query 3590 GTATTTACACGATTGAATGA--TGGA-TCAAATGAATTGATATATTTTGCTGACGTATGC 3646 | || || | | | | || | ||| |||| ||| | |||||||| || || || Sbjct 3986241 ATGTTCACGCAACCAGACAACTTGCAGTCAGATGACTTGCTGTATTTTGCAGATGTTTGT 3986182 Query 3647 GCTGGTCCAGGTGGTTTCAGTGAATATATGTTATGGAGAAAGAAATGGAATATCAAAGGT 3706 || || || || || |||||||||||| | || ||||| || || ||| ||||| Sbjct 3986181 GCAGGACCTGGAGGATTCAGTGAATATGTCTTGTGGAGGAAAAAGTGGCGAGCAAAAGGG 3986122 Query 3707 TATGGTATGACG-TTACGCGaaa--aaaaTGATTTTCAACTGAACAGATTTT-ACGATA- 3761 | |||| | ||| ||| ||| ||||||| ||| |||| | |||||| | | | Sbjct 3986121 TTTGGTTTTACGCTTAA---AAATGAAAATGACTTTAAACTCCAT-GATTTTCATGCTGG 3986066 Query 3762 ACTTTTCGGAAACTTTACACCCGTATTATGGTCCGCTTAACGATGGTAATATCTACAATT 3821 || | || ||||||| || || |||||||| || | ||||||||| | || | Sbjct 3986065 ACCATGCG-AAACTTTTCATCCTTATTATGGACCTAAAGAAGATGGTAATGTTTATGACC 3986007 Query 3822 CACAAAATCAGAAAGGTTTTTGTGAAATGATTATGAAAGATACCGAAGGAAAAGGTGTAC 3881 | |||||||| | || || ||||||||||| | || | || ||||||| | Sbjct 3986006 CCAAAAATCAGGTGGCCTTAAAAGAGTTGATTATGAAACAAACAGGAGATCAAGGTGTTC 3985947 Query 3882 ATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGT 3941 |||||||||||||||| ||||| || || || || || || |||||||| || ||||| Sbjct 3985946 ATTTTATGATGGCTGATGGTGGATTTTCTGTCGAAGGACAGGAAAATATACAGGAAATTC 3985887 Query 3942 TATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTG 4001 | || || || | || | ||||| |||||| | || ||||||| | || | ||||| Sbjct 3985886 TTTCAAAGCAGTTATACCTTTGTCAGTGTTTAGTAGCGCTGATGATTGTCCGTACTGGTG 3985827 Query 4002 GTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATT 4061 | || | ||| | || || || || | |||||||| |||||||| || |||| || Sbjct 3985826 GACACTTTGTGACAAAGTTGTTTGACTTGTTTACACCATTTAGTGCAGGACTAGTTTACA 3985767 Query 4062 TGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGCGACCGGCCA 4121 | |||||| | | ||| ||| | ||||||| || ||| || |||| |||| |||| Sbjct 3985766 TAATGTATCGCTGCTTTGATCAAGTCAGTATTTTTAAGCCAAATACATCTAGACCAGCCA 3985707 Query 4122 ATTCTGAAAGATA 4134 ||||||||||||| Sbjct 3985706 ATTCTGAAAGATA 3985694 >seq4679 Length=2976862 Score = 102 bits (112), Expect = 5e-17 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 5923 CAGATATGTGCGGCTGCTCCAGGAGGTGGTAAAGACGCATGCCAAGGTGATTCGGGTGGC 5982 ||||| ||||| ||| |||| ||||||||||||| | || || ||||| || ||||| Sbjct 170675 CAGATCTGTGCCGCTTTCCCAGCAGGTGGTAAAGACACCTGTCAGGGTGACTCTGGTGGA 170616 Query 5983 CCGTTAGTTGTCGATAACCGCTTAGCTGGTATCGTGTCATGGGGTAATGGATGTGGTCGT 6042 ||| ||||| | | | || |||||| ||||| |||||||| |||||||||| | Sbjct 170615 CCGCTAGTTATTGCTGGTCGTCAAGCTGGAATCGTCTCATGGGGCAATGGATGTGCGAGG 170556 Query 6043 ACAGGATGGCCCGGAGCTTACACTGAAATCGCGCCGTTCCGACACTGGATT 6093 | |||| || || | |||||||| || ||| | | || |||||||| Sbjct 170555 AAGGGATACCCTGGCGTATACACTGAGATTGCGGCAGTTCGCGACTGGATT 170505 Score = 98.7 bits (108), Expect = 5e-16 Identities = 127/173 (73%), Gaps = 3/173 (2%) Strand=Plus/Plus Query 5923 CAGATATGTGCGGCTG-CTCC--AGGAGGTGGTAAAGACGCATGCCAAGGTGATTCGGGT 5979 ||||| ||||| ||| || | || ||||| || ||||| ||||| |||||||| ||| Sbjct 147795 CAGATCTGTGCTGCTTACTACGGAGTCGGTGGAAAGGACGCCTGCCAGGGTGATTCCGGT 147854 Query 5980 GGCCCGTTAGTTGTCGATAACCGCTTAGCTGGTATCGTGTCATGGGGTAATGGATGTGGT 6039 || || |||| | ||||| || | ||||| ||||| || |||||||| || || | | Sbjct 147855 GGTCCTTTAGCTATCGATGGACGTCTTGCTGGAATCGTTTCTTGGGGTAACGGCTGCGCT 147914 Query 6040 CGTACAGGATGGCCCGGAGCTTACACTGAAATCGCGCCGTTCCGACACTGGAT 6092 | ||| || ||||||| |||||||||||||| | | | | ||||||| Sbjct 147915 GATCCAGAATACCCCGGAGTATACACTGAAATCGCACATTACAGCGACTGGAT 147967 Score = 89.7 bits (98), Expect = 3e-13 Identities = 141/200 (71%), Gaps = 8/200 (4%) Strand=Plus/Minus Query 5897 AATCATGGGGTGGTTTGCCAGAAAACCAGATATGTGCGGCTGCTCCAGGAGGTGGTAAAG 5956 || ||||||||||| | || | |||||||| || ||| |||| |||||||||| Sbjct 168978 AACCATGGGGTGGTATTCCCCAGGGACAGATATGCGCTGCTTTCCCAGCCGGTGGTAAAG 168919 Query 5957 ACGCATGCCAAGGTGATTCGGGTGGCCCGTTAG---TTGTC-GATAACCGCTTAGCTGGT 6012 || | |||||||| || || ||||||||| | | ||| | || ||| |||||| Sbjct 168918 ACACCTGCCAAGGCGACTCCGGTGGCCCGCTCGTCATTGGCGGACAAC----AAGCTGGA 168863 Query 6013 ATCGTGTCATGGGGTAATGGATGTGGTCGTACAGGATGGCCCGGAGCTTACACTGAAATC 6072 || || || ||||| || || |||| | | |||| ||||||| |||||||| || Sbjct 168862 ATTGTCTCGTGGGGCAACGGCTGTGCCAGGAAGGGATACCCCGGAGTCTACACTGAGATT 168803 Query 6073 GCGCCGTTCCGACACTGGAT 6092 ||| | | ||| | ||||| Sbjct 168802 GCGGCTGTTCGAGAATGGAT 168783 Score = 86.0 bits (94), Expect = 3e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 5896 CAATCATGGGGTGGTTTGCCAGAAAACCAGATATGTGCGGCTGCTCCAGGAGGTGGTAAA 5955 ||||| |||||||| | || || ||||| || || || |||| || || || Sbjct 165428 CAATCTTGGGGTGGAGTCCCCGAGGGACAGATTTGCGCTGCCTACCCAGCTGGAGGCAAG 165487 Query 5956 GACGCATGCCAAGGTGATTCGGGTGGCCCGTTAGTTGTCGATAACCGCTTAGCTGGTATC 6015 ||| | ||||| ||||| ||||||||||| |||| ||| | || |||||| || Sbjct 165488 GACACTTGCCAGGGTGACTCGGGTGGCCCACTAGTCATCGCTGGACGACAAGCTGGAATT 165547 Query 6016 GTGTCATGGGGTAATGGATGTGGTCGTACAGGATGGCCCGGAGCTTACACTGAAATCGCG 6075 || |||||||| || ||||||| ||| | || | ||||||| ||| || ||| | || Sbjct 165548 GTATCATGGGGCAACGGATGTGCTCGAAAGGGCTACCCCGGAGTTTATACCGAAGTAGCT 165607 Query 6076 CCGTTCCGACACTGGAT 6092 |||| ||||||| Sbjct 165608 TGTTTCCAGGACTGGAT 165624 Score = 84.2 bits (92), Expect = 1e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 5899 TCATGGGGTGGTTTGCCAGAAAACCAGATATGTGCGGCTGCTCCAGGAGGTGGTAAAGAC 5958 |||||||||||| | ||||| || || || || || ||||| ||||| || ||| Sbjct 162743 TCATGGGGTGGTATCCCAGAGGGTCAAATTTGCGCTGCCTATCCAGCTGGTGGAAAGGAC 162802 Query 5959 GCATGCCAAGGTGATTCGGGTGGCCCGTTAGTTGTCGATAACCGCTTAGCTGGTATCGTG 6018 | ||||| ||||| || || || || | || || | | ||| ||| |||||||| Sbjct 162803 ACCTGCCAGGGTGACTCCGGCGGTCCTCTCGTCGTTGCTGGACGCCAAGCCGGTATCGTC 162862 Query 6019 TCATGGGGTAATGGATGTGGTCGTACA-GGATGGCCCGGAGCTTACACTGAAATCGCGCC 6077 || |||||||| || || | | ||| |||| ||||| | ||| ||||||||||| | Sbjct 162863 TCCTGGGGTAACGGTTG-CGCCAGACAGGGATATCCCGGCGTTTATACTGAAATCGCAGC 162921 Query 6078 GTTCCGACACTGGAT 6092 |||| | ||||| Sbjct 162922 TGTCCGCGAATGGAT 162936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276537044118736