Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3620 131 2e-25 seq2005 109 5e-19 seq4270 87.8 2e-12 >seq3620 Length=288302 Score = 131 bits (144), Expect = 2e-25 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839 ||| || || | || || |||||||| | |||||||| ||||| | || || ||| Sbjct 91859 TCCACCCCTAAGACGTAAGACCAAGTGGAGTGTAGATTCTTTTTGAATATTGTAGTCGG- 91801 Query 94840 CATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897 | || || || ||| |||| ||||||||| |||||||||| | ||||| |||||| Sbjct 91800 -AGAGCGTACGACCATCTTCCAATTGTTTTCCGGCAAAGATTAAACGCTGCTGGTCTGGA 91742 Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957 || || || |||||||| | ||||| |||||||| ||| || |||| | ||| Sbjct 91741 GGGATTCCCTCTTTGTCCTGGATTTTAGCCTTGACATTTTCGATCGTATCAGAGGCCTCG 91682 Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || |||| ||||||||||| ||||| | || || || ||||||||||| Sbjct 91681 ACTTCAAGTGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 91632 Score = 122 bits (134), Expect = 8e-23 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || ||||| | | |||||| ||||| |||| || ||||| ||||| | ||||| Sbjct 90042 TTTGCATACCTCCACGAAGTCGCAATACCAAATGCAGCGTGGATTCTTTTTGTATGTTAT 89983 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | || || ||| |||||| | |||||||| | ||||| || || ||||| | Sbjct 89982 AGTCTGACAATGTGCGCCCATCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGGT 89923 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||| || || || |||||||| | |||||| ||||| || ||| ||||| | Sbjct 89922 CTGGTGGGATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAAG 89863 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| |||| ||||||||||| || || || || || || ||||||||||| Sbjct 89862 CCTCGACTTCAAGTGTGATGGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCAT 89808 Score = 113 bits (124), Expect = 4e-20 Identities = 169/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||||||||||| ||||| |||||||| | |||||||| ||||| | Sbjct 89591 AAAAATTTGCATGCCTCCTCTCAAACGCAAGACCAAGTGAAGTGTAGATTCTTTTTGAAT 89532 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 || || ||| || ||| ||| || ||||| || || | ||||| || || || Sbjct 89531 ATTGTAGTCGGACAGAGTACGTCCATCTTCGAGCTGCTTGCCAGCGAAGATCAACCTCTG 89472 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||| ||||| ||||| ||||| || || | || || | |||||| ||| ||||| Sbjct 89471 CTGGTCTGGGGGAATGCCTTCCTTATCTTGGATCTTGGTCTTGACATTCTCGATCGTGTC 89412 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || |||| |||||||| || || || | || || || ||||||||||| Sbjct 89411 GGATGCCTCAACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 89352 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || ||| ||||| || | ||| || || || || | ||| |||||| || ||| Sbjct 90479 TCTCAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGTCC 90420 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| || || || ||||| | |||||||| | ||||||||||||||||||||||| || Sbjct 90419 ATCTTCGAGTTGCTTTCCAGCGAAGATTAAACGCTGCTGATCTGGAGGAATACCTTCCTT 90360 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | ||||| |||||||| ||| ||||| | || || |||| ||||| Sbjct 90359 ATCTTGGATTTTGGCCTTGACATTCTCGATCGTGTCGGATGCCTCAACCTCAAGGGTGAT 90300 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || | || || || ||||||||||| Sbjct 90299 GGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90264 Score = 98.7 bits (108), Expect = 9e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || ||||||||||| | ||| || || || ||| ||| || || || || || Sbjct 89776 GTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCGAGTTGCTTACCA 89717 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 |||| || | || ||||||||||| ||||||||||||||||| | ||| || |||||| Sbjct 89716 GCAAAAATCAGCCTCTGCTGATCTGGGGGAATACCTTCTTTGTCTTGAATCTTAGCCTTG 89657 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | || |||| ||||| || | || || ||||| |||||||| || Sbjct 89656 ACATTCTCAATCGTATCAGAAGCTTCGACTTCCAGAGTAATTGTTTTGCCAGTAAGCGTC 89597 Query 94991 TTCACAAAGATCTGCATGC 95009 || ||||| || ||||||| Sbjct 89596 TTAACAAAAATTTGCATGC 89578 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 || ||||| | |||||| || || || | ||||||||| || |||| |||||| Sbjct 90244 ACTAAGTGAAGAGTAGACTCTTTCTGTATGTTATAATCAGACAGAGTGCGTCCATCCTCA 90185 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| |||||| | || || || | ||||| || || ||||||||||| ||||| | Sbjct 90184 AGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGG 90125 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| ||| ||||| | || || || | || || || || Sbjct 90124 ATCTTAGCCTTTACGTTCTCGATGGTGTCGGACGCTTCAACTTCGAGGGTAATAGTCTTA 90065 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| || || ||||| ||||| Sbjct 90064 CCAGTCAGAGTCTTTACGAAGATTTGCAT 90036 >seq2005 Length=1592806 Score = 109 bits (120), Expect = 5e-19 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || |||||| | | ||||| ||||| || || || || |||||||| | ||| || || Sbjct 906415 CATTCCTCCGCGAAGACGCAAGACCAAATGTAAGGTGGACTCCTTTTGGATGTTGTAGTC 906356 Query 94837 GCTCATAGTGT--TGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCT 94894 | | || || | ||||||||||||||| ||| ||||||| | | ||||| ||| Sbjct 906355 --TGAAAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCT 906298 Query 94895 GGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG 94954 || || || ||||| || || | |||||| || |||||| ||| |||||| | Sbjct 906297 GGTGGGATGCCTTCCTTATCCTGAATTTTAGCTTTGACGTTTTCGATAGTGTCGGAAGCT 906238 Query 94955 TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | || |||||||| || || | ||||| || || |||||||| Sbjct 906237 TCAACTTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906185 Score = 104 bits (114), Expect = 2e-17 Identities = 164/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || ||||||||| | |||| |||||||| | |||||| || ||||| | || | Sbjct 905051 TTTGCATTCCTCCTCTTAGACGCAGGACCAAGTGAAGAGTAGACTCTTTTTGAATATTGT 904992 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| | ||| ||| ||||||||||| || ||||||| | | || || | Sbjct 904991 AATCAGAAAGAGTACGTCCATCTTCCAGCTGTTTGCCAGCAAAGATAAGACGCTGTTGGT 904932 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | |||||||| ||||||||||| | || || || ||||| | | ||||| | Sbjct 904931 CAGGAGGAATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATTGTGTCTGAAG 904872 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | || ||||| |||||||| | ||||| |||||||| ||||| Sbjct 904871 CTTCAACCTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTAACAAAGATTTGCAT 904817 Score = 100 bits (110), Expect = 3e-16 Identities = 169/242 (70%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAG-TGCAAAGTAGATTCCTTTTGCAC 94827 ||| ||| || ||| |||| | || || | |||| || | || ||||| ||||| | Sbjct 905739 AAAATTTGCATTCCACCTCGAAGACG-AAGAACAAGATGGAGTGTTGATTCTTTTTGGAT 905681 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| || || || ||| ||||| ||||| || |||| || | | ||| Sbjct 905680 GTTGTAATCAGACAGGGTTCTGCCATCTTCCAGTTGTTTACCAGCAAATATGAGACGTTG 905621 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || || ||||| || ||||||||||| | ||| || || ||||| ||| ||| || Sbjct 905620 TTGGTCAGGAGGGATGCCTTCTTTGTCTTGAATCTTGGCTTTGACATTTTCGATAGTATC 905561 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | || ||||| |||||||| | |||||| ||||| || ||||| Sbjct 905560 AGAAGCCTCTACTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCAT 905501 Query 95008 GC 95009 || Sbjct 905500 GC 905499 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 94862 TGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATT 94921 ||||| || ||||||| | | ||||||||||||||||| || |||||||| | ||| Sbjct 904734 TGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATTCCCTCTTTGTCCTGGATT 904675 Query 94922 TTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCA 94981 || || ||||| | | ||||| | | || || || | ||||||||||| ||| Sbjct 904674 TTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCCACTTCCAGAGTGATGGTTTTGCCA 904615 Query 94982 GTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||||||||||||||| Sbjct 904614 GTCAAGGTTTTCACAAAGATCTGCAT 904589 Score = 96.9 bits (106), Expect = 3e-15 Identities = 167/241 (69%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| | | || ||||||||||| || | |||| || | || || || ||||| | | Sbjct 906195 AAAATCTGCATTCCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATG 906136 Query 94829 TTATAATCGCTCATAGTGT--TGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 || || || | | || || | ||||||||||||||| ||| ||||||| | | | Sbjct 906135 TTGTAGTC--TGAAAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCT 906078 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946 |||| ||||| || || ||||| || || | |||||| || |||||| ||| ||||| Sbjct 906077 GCTGGTCTGGTGGGATGCCTTCCTTATCCTGAATTTTAGCTTTGACGTTTTCGATAGTGT 906018 Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 | | || || || | || |||||||| || || | ||||| || || || |||| Sbjct 906017 CGGAAGCTTCAACTTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATTTGCA 905958 Query 95007 T 95007 | Sbjct 905957 T 905957 Score = 93.3 bits (102), Expect = 4e-14 Identities = 168/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAG-TGCAAAGTAGATTCCTTTTGCA 94826 |||| ||| || ||||||| | || || | |||| || | ||| ||||| ||||| | Sbjct 905512 AAAAATTTGCATGCCTCCTCGAAGACG-AAGAACAAGATGGAGAGTTGATTCTTTTTGGA 905454 Query 94827 CGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 ||| ||||| || || | ||| ||||| || ||||| | || || | | | Sbjct 905453 TGTTGTAATCAGACAGGGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCT 905394 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946 | |||||||| || |||||||||||||| | ||||| || || || | | || | Sbjct 905393 GTTGATCTGGTGGGATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTAT 905334 Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 | | || || || | ||||||||||| ||||| |||||||| ||||| || |||| Sbjct 905333 CTGATGCTTCAACCTCCAGAGTGATGGTTTTACCAGTCAGAGTTTTTACAAAAATTTGCA 905274 Query 95007 TGC 95009 ||| Sbjct 905273 TGC 905271 >seq4270 Length=22512 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/193 (71%), Gaps = 5/193 (3%) Strand=Plus/Plus Query 94818 CCTTT-TGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAA 94874 ||||| || | ||| |||||| ||| |||| || |||||| | |||||| || ||| Sbjct 4610 CCTTTCTGTATGTTGTAATCGG--ATAATGTTCGACCATCCTCTAACTGTTTGCCAGCAA 4667 Query 94875 AGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGG 94934 | || |||| || |||||||||||||||||||| || || | ||||| || || || Sbjct 4668 AAATCAATCGCTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATTTTAGCTTTAACAT 4727 Query 94935 CGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCA 94994 | | ||| || | ||||| || | || ||||| || || || | |||||| | Sbjct 4728 TTTCTATAGTATCTGAAGCTTCGACCTCTAAAGTTATGGTCTTGCCTGTCAAAGTTTTGA 4787 Query 94995 CAAAGATCTGCAT 95007 |||| || ||||| Sbjct 4788 CAAAAATTTGCAT 4800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448263674920320