Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_006635.1 Length=29874 Score E Sequences producing significant alignments: (Bits) Value seq2387 223 7e-54 seq3401 217 3e-52 seq3484 196 9e-46 seq3196 96.9 7e-16 seq813 96.9 7e-16 seq4552 87.8 3e-13 seq1294 86.0 1e-12 seq4585 80.6 5e-11 >seq2387 Length=144888 Score = 223 bits (246), Expect = 7e-54 Identities = 185/224 (83%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 6561 TTTTTCTGCCCTCCGGCCGGAAAGTGGCAACTTTCTGGCCGCTGCGCTAAACAAAGTTGC 6620 ||||| |||||||| | ||| | || |||||||||||||||| |||| || || | Sbjct 139856 TTTTTGTGCCCTCCAGTTGGATTGCTTAAAGTTTCTGGCCGCTGCGCGAAACGAACTTAC 139797 Query 6621 CACATTCCGGCTACGTCGAGCAGAAAAATAGTATACACACCTTGGCCAGTAAAAAGTAAA 6680 | | ||||||| ||||||||| | || || ||||||||||| ||| |||||||| ||| Sbjct 139796 CGCTTTCCGGCACCGTCGAGCAAACAAGTAATATACACACCTGGGCT-GTAAAAAG-AAA 139739 Query 6681 GCCTCAGATCACATGTTTGTCAACCTCGGCTTCGCCTCGGCCAACAATTACATGTGATCT 6740 |||||||||||||||||| | ||||| |||| | |||| || ||||||| ||||||||| Sbjct 139738 GCCTCAGATCACATGTTTATTGACCTCAGCTTTGACTCGACCGACAATTAAATGTGATCT 139679 Query 6741 GAGACTTTTCTTATTTTACTGGCCTAGGTATGTAATATACTATT 6784 ||||| |||||||||||||||||||| ||||||||| ||||||| Sbjct 139678 GAGACATTTCTTATTTTACTGGCCTANGTATGTAATCTACTATT 139635 Score = 206 bits (228), Expect = 5e-49 Identities = 181/223 (81%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 6003 ATAGTATATTACATACCTAGGCCAGTAAAATAAGAAAAGTCTCAGACCACATGTAATTGC 6062 |||||| ||||||||| |||||||||||||||||||| |||||||| ||||| |||||| Sbjct 139636 ATAGTAGATTACATACNTAGGCCAGTAAAATAAGAAATGTCTCAGATCACATTTAATTGT 139695 Query 6063 TGGCCGAGGCGAAGCCAAGGTTGACAAACATGTGGTCTGAGGCTTTACTTTTTACTGGCC 6122 || |||| | |||| |||| | ||||||||| ||||||||||| |||||||| ||| Sbjct 139696 CGGTCGAGTCAAAGCTGAGGTCAATAAACATGTGATCTGAGGCTTT-CTTTTTAC-AGCC 139753 Query 6123 AAGGTGTGTATACTATTTTTCTGCTCGACGTAGCCGGAACGTGGCAACTTTGTTTAGCGC 6182 ||||||||||| || || | ||||||||| ||||||| | || || || |||| |||| Sbjct 139754 CAGGTGTGTATATTACTTGTTTGCTCGACGGTGCCGGAAAGCGGTAAGTTCGTTTCGCGC 139813 Query 6183 AGCGGCCAGAAAGTTTCCACTTTCCGGCCGGAGGGCAGAAAAA 6225 |||||||||||| ||| | ||| | |||||||| ||||| Sbjct 139814 AGCGGCCAGAAACTTTAAGCAATCCAACTGGAGGGCACAAAAA 139856 >seq3401 Length=10799 Score = 217 bits (240), Expect = 3e-52 Identities = 181/220 (82%), Gaps = 1/220 (0%) Strand=Plus/Plus Query 6565 TCTGCCCTCCGGCCGGAAAGTGGCAACTTTCTGGCCGCTGCGCTAAACAAAGTTGCCACA 6624 |||||||||| | ||| | || |||||||||||||||| |||| || || || | Sbjct 1561 TCTGCCCTCCAGTTGGATTGCTTAAAGTTTCTGGCCGCTGCGCGAAACGAACTTACCGCT 1620 Query 6625 TTCCGGCTACGTCGAGCAGAAAAATAGTATACACACCTTGGCCAGTAAAAAGTAAAGCCT 6684 ||||||| ||||||||| | || || ||||||||||| ||| ||||||| ||||||| Sbjct 1621 TTCCGGCACCGTCGAGCAAACAAGTAATATACACACCTGGGCT-GTAAAAAAGAAAGCCT 1679 Query 6685 CAGATCACATGTTTGTCAACCTCGGCTTCGCCTCGGCCAACAATTACATGTGATCTGAGA 6744 |||||||||||||| | ||||| |||| | |||| || ||||||| ||||||||||||| Sbjct 1680 CAGATCACATGTTTATTGACCTCAGCTTTGACTCGACCGACAATTAAATGTGATCTGAGA 1739 Query 6745 CTTTTCTTATTTTACTGGCCTAGGTATGTAATATACTATT 6784 | |||||||||||||||||||| ||||||||| ||||||| Sbjct 1740 CATTTCTTATTTTACTGGCCTACGTATGTAATCTACTATT 1779 Score = 203 bits (224), Expect = 6e-48 Identities = 177/219 (81%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 6003 ATAGTATATTACATACCTAGGCCAGTAAAATAAGAAAAGTCTCAGACCACATGTAATTGC 6062 |||||| ||||||||| |||||||||||||||||||| |||||||| ||||| |||||| Sbjct 1778 ATAGTAGATTACATACGTAGGCCAGTAAAATAAGAAATGTCTCAGATCACATTTAATTGT 1719 Query 6063 TGGCCGAGGCGAAGCCAAGGTTGACAAACATGTGGTCTGAGGCTTTACTTTTTACTGGCC 6122 || |||| | |||| |||| | ||||||||| ||||||||||| ||||||| ||| Sbjct 1718 CGGTCGAGTCAAAGCTGAGGTCAATAAACATGTGATCTGAGGCTTTCTTTTTTAC-AGCC 1660 Query 6123 AAGGTGTGTATACTATTTTTCTGCTCGACGTAGCCGGAACGTGGCAACTTTGTTTAGCGC 6182 ||||||||||| || || | ||||||||| ||||||| | || || || |||| |||| Sbjct 1659 CAGGTGTGTATATTACTTGTTTGCTCGACGGTGCCGGAAAGCGGTAAGTTCGTTTCGCGC 1600 Query 6183 AGCGGCCAGAAAGTTTCCACTTTCCGGCCGGAGGGCAGA 6221 |||||||||||| ||| | ||| | |||||||||| Sbjct 1599 AGCGGCCAGAAACTTTAAGCAATCCAACTGGAGGGCAGA 1561 >seq3484 Length=4033909 Score = 196 bits (216), Expect = 9e-46 Identities = 167/208 (80%), Gaps = 11/208 (5%) Strand=Plus/Plus Query 6574 CGGCCGGAAAGTGGCAACTTTCTGGCCGCTGCGCTAAACAAAGTTGCCACATTCCGGCTA 6633 ||||||||||| | ||||||||||||||||||| |||| |||||||| | ||||||| Sbjct 105468 CGGCCGGAAAGCGCCAACTTTCTGGCCGCTGCGTAAAACGAAGTTGCCGCTTTCCGGCAC 105527 Query 6634 CGTCGAGCAGAAAAATAGTATACACACCTTGGCCAGTAAAAAGTAAAGCCTCAGATCACA 6693 ||||||| | |||| ||||||| ||||| |||||||||||| ||||||||||||||| Sbjct 105528 CGTCGAGGAACAAAACAGTATACGCACCTGGGCCAGTAAAAAAGAAAGCCTCAGATCACC 105587 Query 6694 TGTTTGTCAACCTCGGCTTCGCCTCGGCCAACAATTACATGTGATCTGAGACTTTTCTTA 6753 ||||| || | ||| || ||||||||||||| ||||||| ||| ||| Sbjct 105588 TGTTT-----------ATTGACTTCGACCGACAATTACATGTGTTCTGAGAGATTTATTA 105636 Query 6754 TTTTACTGGCCTAGGTATGTAATATACT 6781 ||||||||| ||||||||||||| |||| Sbjct 105637 TTTTACTGGTCTAGGTATGTAATCTACT 105664 Score = 187 bits (206), Expect = 5e-43 Identities = 166/208 (80%), Gaps = 11/208 (5%) Strand=Plus/Minus Query 6005 AGTATATTACATACCTAGGCCAGTAAAATAAGAAAAGTCTCAGACCACATGTAATTGCTG 6064 |||| ||||||||||||| |||||||||||| ||| ||||||| |||||||||||| | Sbjct 105664 AGTAGATTACATACCTAGACCAGTAAAATAATAAATCTCTCAGAACACATGTAATTGTCG 105605 Query 6065 GCCGAGGCGAAGCCAAGGTTGACAAACATGTGGTCTGAGGCTTTACTTTTTACTGGCCAA 6124 | ||| || ||| ||||| ||| ||||||||||| |||||||||||| | Sbjct 105604 GTCGA-----AGTCAAT------AAACAGGTGATCTGAGGCTTTCTTTTTTACTGGCCCA 105556 Query 6125 GGTGTGTATACTATTTTTCTGCTCGACGTAGCCGGAACGTGGCAACTTTGTTTAGCGCAG 6184 |||| ||||||| |||| | ||||||| ||||||| | |||||||| |||| ||||| Sbjct 105555 GGTGCGTATACTGTTTTGTTCCTCGACGGTGCCGGAAAGCGGCAACTTCGTTTTACGCAG 105496 Query 6185 CGGCCAGAAAGTTTCCACTTTCCGGCCG 6212 ||||||||||||| | ||||||||||| Sbjct 105495 CGGCCAGAAAGTTGGCGCTTTCCGGCCG 105468 >seq3196 Length=912541 Score = 96.9 bits (106), Expect = 7e-16 Identities = 104/135 (77%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 6645 AAAATAGTATACACACCTTGGCCAGTAAAAAGTAAAGCCTCAGATCACATGTTTGTCAAC 6704 ||||| | ||| |||| |||| | || || || || |||||||||||||||| || | Sbjct 435908 AAAATCGCGTACGCACCACGGCCGGGAACAAAGAATGC-TCAGATCACATGTTTGCCACC 435966 Query 6705 CTCGGCTTCGCCTCGGCCAACAAT-TACATGTGATCTGAGACTTTTCTTATTTTACTGGC 6763 |||||||| ||||||| | |||| ||||| ||| || ||| || ||||||| | ||| Sbjct 435967 CTCGGCTTTGCCTCGGGCGGCAATACACATGCGATATGGGACATTCTTTATTTTCCCGGC 436026 Query 6764 CTAGGTATGTAATAT 6778 |||| || ||||||| Sbjct 436027 CTAGATACGTAATAT 436041 >seq813 Length=2416146 Score = 96.9 bits (106), Expect = 7e-16 Identities = 121/165 (73%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 6621 CACATTCCGGCTACGTCGAGCA-GAAAAATAGTATACACACCTTGGCCAGTAAAAAGTAA 6679 ||| ||||| |||| | | ||| | ||||| | ||||||||| | | || || || Sbjct 2393691 CACTTTCCGACTAC-TGGGGCATGTAAAATCGCATACACACCACGTCTGCGAACAAAGAA 2393633 Query 6680 AGCCTCAGATCACATGTTTGTCAACCTCGGCTTCGCCTCGGCCAACAATTACATGTGATC 6739 | ||||||| |||||||| || |||||||||||||| || | | | |||| Sbjct 2393632 TGT-TCAGATCGCATGTTTGCCACCCTCGGCTTCGCCTAGGGCGAAANNNNNNNNNGATC 2393574 Query 6740 TGAGACTTTTCTTATTTTACTGGCCTAGGTATGTAATATACTATT 6784 || ||| || ||||||| | |||||||||||||||||||||||| Sbjct 2393573 TGGGACATTCTTTATTTTCCAGGCCTAGGTATGTAATATACTATT 2393529 >seq4552 Length=3085384 Score = 87.8 bits (96), Expect = 3e-13 Identities = 110/148 (74%), Gaps = 10/148 (7%) Strand=Plus/Minus Query 6645 AAAATAGTATACACACCTTGGCC-AGTAAAAAGTAAAGCCTCAGATCACATGTTTGTCAA 6703 ||||||| ||| ||| |||| || | |||| || |||||||| |||||||| || Sbjct 2461762 AAAATAGAGTACGTACCACGGCCGAGAATAAAG--AATGCTCAGATCGCATGTTTGCCAT 2461705 Query 6704 ------CCTCGGCTTCGCCTCGGCCAACAATT-ACATGTGATCTGAGACTTTTCTTATTT 6756 ||||||||||||||||| | |||| ||||| |||| ||||| || |||||| Sbjct 2461704 GCGCATCCTCGGCTTCGCCTCGGACGGCAATACACATGCGATCCGAGACATTCTTTATTT 2461645 Query 6757 TACTGGCCTAGGTATGTAATATACTATT 6784 | | || ||| || ||||||||||||| Sbjct 2461644 TCCCAGCATAGTTACGTAATATACTATT 2461617 >seq1294 Length=328070 Score = 86.0 bits (94), Expect = 1e-12 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 6133 TACTATTTTTCTGCTCGACGTAGCCGGAACGTGGCAACTTTGTTTAGCGCAGCGGCCAGA 6192 |||| | ||||||||| || | ||| | | |||||||| |||| ||||||||||| || Sbjct 62742 TACTGCTGTTCTGCTCGGCGGTGACGGGAGGCGGCAACTTCGTTTCGCGCAGCGGCCGGA 62801 Query 6193 AAGTTTCCACTTTCCGGCCGGAGGGCAGAA 6222 | |||| | |||||||||||||||||| || Sbjct 62802 ATGTTTGCGCTTTCCGGCCGGAGGGCATAA 62831 Score = 82.4 bits (90), Expect = 1e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 6564 TTCTGCCCTCCGGCCGGAAAGTGGCAACTTTCTGGCCGCTGCGCTAAACAAAGTTGCCAC 6623 || |||||||||||||||||| | ||| ||| ||||||||||| |||| |||||||| | Sbjct 62831 TTATGCCCTCCGGCCGGAAAGCGCAAACATTCCGGCCGCTGCGCGAAACGAAGTTGCCGC 62772 Query 6624 ATTCCGGCTACGTCGAGCAGAAAAATAGTA 6653 | ||| | || ||||||||| | |||| Sbjct 62771 CTCCCGTCACCGCCGAGCAGAACAGCAGTA 62742 >seq4585 Length=260172 Score = 80.6 bits (88), Expect = 5e-11 Identities = 87/112 (78%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 6683 CTCAGATCACAT--GTTTGTCAACCTCGGCTTCGCCTCGGCCAACAATTA-CATGTGATC 6739 |||||||| ||| ||||| || | |||||||| ||| || | ||||| ||||||||| Sbjct 204756 CTCAGATCGCATATGTTTGCCACCGTCGGCTTCACCTTGGGCGACAATACGCATGTGATC 204697 Query 6740 TGAGACTTTTCTTATTTTACTGGCCTAGGTATGTAATATACTATT-TATTAT 6790 | || || ||||||| | ||||||||| |||||||||||| |||||| Sbjct 204696 TTGGATATTCTTTATTTTCCCAGCCTAGGTACATAATATACTATTGTATTAT 204645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95469630931584