Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2352 170 3e-38 seq4696 158 2e-34 seq704 149 1e-31 seq1247 109 9e-20 seq3443 96.9 5e-16 >seq2352 Length=3906906 Score = 170 bits (188), Expect = 3e-38 Identities = 198/267 (74%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | | || || |||||||| || ||||||||||| |||||| Sbjct 2234379 GCCAAGCGTCATCGCAAAGTATTGCGTGACAACATCCAGGGCATCACCAAGCCCGCTATC 2234320 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || |||||||| | |||||||| || |||||| |||| ||| | |||| || || | Sbjct 2234319 CGCCGTCTGGCCAGACGTGGTGGTGTTAAGCGTATCTCCGGACTCATCTACGAGGAAACC 2234260 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | ||| ||||||| ||| ||| |||| ||| ||| || || |||||| Sbjct 2234259 CGCGGAGTCCTCAAGGTCTTCCTTGAGAACGTGATCCGTGACGCTGTCACTTACACCGAG 2234200 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| |||||| |||||||| | ||||| || |||| | |||||| Sbjct 2234199 CACGCCAAGAGGAAGACAGTCACCGCCATGGATGTTGTCTACGCTCTGAAGAGACAAGGC 2234140 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || || ||||| ||||| Sbjct 2234139 CGAACCCTCTACGGATTTGGCGGTTAA 2234113 Score = 170 bits (188), Expect = 3e-38 Identities = 198/267 (74%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || || ||||||| | | | || || |||||||| || ||||||||||| || ||| Sbjct 3905946 GCCAAACGCCATCGCAAAGTTTTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCATC 3906005 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||||||| | |||||||| ||||||||| |||| || || |||| || || | | Sbjct 3906006 CGCCGTCTGGCTAGACGTGGTGGTGTCAAGCGTATCTCCGGTCTGATCTACGAGGAAACT 3906065 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || | ||| ||||||| ||| ||| |||| ||| ||| | ||| |||||| Sbjct 3906066 CGTGGAGTCCTCAAGGTCTTCCTTGAGAACGTCATCCGTGACGCTGTAACCTACACCGAG 3906125 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| ||||| ||||||| | |||||||| | || | |||||| Sbjct 3906126 CACGCCAAGAGGAAGACCGTCACTGCCATGGACGTTGTCTATGCTCTCAAGAGACAAGGC 3906185 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || || ||||| ||||| Sbjct 3906186 CGCACTCTCTACGGATTTGGCGGTTAA 3906212 Score = 167 bits (184), Expect = 4e-37 Identities = 197/267 (74%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | | | || |||||||| || ||||||||||| |||||| Sbjct 2162598 GCCAAGCGTCATCGCAAAGTATTGGGTGACAACATCCAGGGCATCACCAAGCCCGCTATC 2162539 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || |||||||| | |||||||| || |||||| |||| ||| | |||| || || | Sbjct 2162538 CGCCGTCTGGCCAGACGTGGTGGTGTTAAGCGTATCTCCGGACTCATCTACGAGGAAACC 2162479 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | ||| ||||||| ||| ||| |||| ||| ||| || || |||||| Sbjct 2162478 CGCGGAGTCCTCAAGGTCTTCCTTGAGAACGTGATCCGTGACGCTGTCACTTACACCGAG 2162419 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| |||||| |||||||| | ||||| || |||| | |||||| Sbjct 2162418 CACGCCAAGAGGAAGACAGTCACCGCCATGGATGTTGTCTACGCTCTGAAGAGACAAGGC 2162359 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || || ||||| ||||| Sbjct 2162358 CGAACCCTCTACGGATTTGGCGGTTAA 2162332 >seq4696 Length=9412112 Score = 158 bits (174), Expect = 2e-34 Identities = 182/243 (75%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| ||||| | | | || ||||| |||||||| || || |||||||| ||||| Sbjct 8598902 GCTAAGCGGCATCGTA-AGGTGTTGCGAGACAACATCCAGGGCATTACCAAGCCCGCTAT 8598960 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||| |||| | |||||||| || |||||| |||| || ||| | || ||||||| Sbjct 8598961 TCGCCGTTTGGCCAGGCGTGGTGGCGTAAAGCGTATCTCCGGCTTGATTTACGAAGAGAC 8599020 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| |||| | ||| ||||||| ||| |||||||| || ||| || || ||||| Sbjct 8599021 CCGTGGTGTTCTCAAGGTCTTCCTTGAGAACGTTATCCGCGACGCTGTCACTTACACCGA 8599080 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| || ||| ||||||| | ||||| || || | | | ||| Sbjct 8599081 GCACGCCAAGAGGAAGACGGTNACCGCCATGGACGTTGTCTACGCTCTGCAGAGACCAGG 8599140 Query 16672 CCG 16674 ||| Sbjct 8599141 CCG 8599143 Score = 154 bits (170), Expect = 2e-33 Identities = 190/260 (73%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || |||||||||| |||||| || || |||||||| |||||||| || ||||| Sbjct 8268113 GCGAAACGTCATCGCAAGGTTCTTCGTGACAATATCCAAGGCATCACCAAACCCGCTATT 8268172 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || | ||||| |||||||||||| ||||||||||| |||| || || | | Sbjct 8268173 CGCCGTCTAGCAAGGCGTGGAGGAGTCAAGCGTATCTCTGGATTGATCTACGAGGAAACT 8268232 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | ||| | |||||| ||| ||| |||| |||||| | ||| ||||| Sbjct 8268233 CGCGGCGTCCTCAAGGTTTTCCTCGAGAACGTCATCCGAGATGCTGTGACCTACACCGAA 8268292 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| || || |||||||| | |||| || | || | ||||| Sbjct 8268293 CACGCCAAGAGGAAGACCGTGACTGCCATGGATGTTATCTACGCTCTCAAGAGACAAGGA 8268352 Query 16673 CGTAAGATTTATGGTTTTGG 16692 || | | || || ||||| Sbjct 8268353 CGCACCCTCTACGGATTTGG 8268372 >seq704 Length=1071093 Score = 149 bits (164), Expect = 1e-31 Identities = 195/268 (73%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| | |||| ||||| |||||||| || ||||||||||| || || Sbjct 152542 GCCAAGCGGCATCGCA-AGGTCTTGCGAGACAACATCCAGGGCATCACCAAGCCCGCCAT 152484 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| |||||||| | || ||||| |||||||| |||| || | |||| || |||| Sbjct 152483 CCGCCGTCTGGCCAGACGCGGTGGTGTCAAGCGCATCTCCGGTCTCATCTACGAGGAGAC 152424 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | || | ||| ||||||| ||| ||| |||| || || | ||| ||||| Sbjct 152423 TCGCGGAGTCCTCAAGGTCTTCCTTGAGAACGTCATCCGGGACGCCGTGACCTACACCGA 152364 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| |||||| ||||||| ||||||| || | || | || || Sbjct 152363 GCACGCCAAGAGGAAGACCGTCACCGCCATGGACGTCGTCTACGCTCTCAAGAGGCAGGG 152304 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || || || || ||||| Sbjct 152303 CCGCACCCTNTACGGGTTCGGCGGTTAA 152276 Score = 143 bits (158), Expect = 4e-30 Identities = 179/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| | || || ||||| |||||||| || ||||||||||| || || Sbjct 149042 GCCAAGCGGCATCGCAAGGTC-CTGCGAGACAACATCCAGGGCATCACCAAGCCCGCCAT 149100 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| |||||||| | || ||||| |||||||| |||| || | |||| || |||| Sbjct 149101 CCGCCGTCTGGCCAGACGCGGTGGTGTCAAGCGCATCTCCGGTCTCATCTACGAGGAGAC 149160 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | || | ||| ||||||| ||| ||| |||| || || | ||| ||||| Sbjct 149161 TCGCGGAGTCCTCAAGGTCTTCCTTGAGAACGTCATCCGGGACGCCGTGACCTACACCGA 149220 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| ||||| ||||||| ||||||| || | || | || || Sbjct 149221 GCACGCCAAGAGGAAGACCGTCACAGCCATGGACGTCGTCTACGCCCTCAAGAGGCAGGG 149280 Query 16672 CCG 16674 ||| Sbjct 149281 CCG 149283 >seq1247 Length=9620 Score = 109 bits (120), Expect = 9e-20 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 16512 GTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCT 16571 |||| ||||||||| |||| || || |||| || |||| ||||| ||| | ||| ||| Sbjct 6504 GTGGTGTCAAGCGTATCTCCGGTCTGATCTACGAGGAGACTCGTGGTGTCCTCAAGGTCT 6563 Query 16572 TCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTG 16631 |||| ||| ||| |||| || || | ||| ||||||||||| || | ||||||| Sbjct 6564 TCCTTGAGAACGTCATCCGCGACGCCGTGACCTACACCGAGCACGCAAAGAGGAAGACTG 6623 Query 16632 TCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTG 16691 |||| ||||||| | ||||| || | ||| | |||||||| | |||| || || | Sbjct 6624 TCACAGCCATGGACGTTGTCTACGCTCTCAAAAGACAAGGCCGCACCCTTTACGGATTCG 6683 Query 16692 GAAGTTAA 16699 | ||||| Sbjct 6684 GCGGTTAA 6691 >seq3443 Length=12625 Score = 96.9 bits (106), Expect = 5e-16 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||| |||||| | | || || ||||| || || ||||||||||| || ||| Sbjct 4168 GCCAAGCGTTATCGCAAAGTATTGCGTGACAACATTCAGGGCATCACCAAGCCTGCCATC 4109 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 || |||||||| | ||| |||| || |||||| |||||||| || |||| ||||||| Sbjct 4108 CGCCGTCTGGCCAGACGTTGTGGTGTTAAGCGTATCTCTGGACTGATCTACGAAGAGA 4051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79070708924016