Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15]
4,912 sequences; 283,606,953 total letters
Query= NC_006645.1
Length=21388
Score E
Sequences producing significant alignments: (Bits) Value
seq4860 111 2e-20
seq330 91.5 2e-14
seq46 91.5 2e-14
seq668 89.7 7e-14
seq3797 84.2 3e-12
>seq4860
Length=83171
Score = 111 bits (122), Expect = 2e-20
Identities = 110/137 (80%), Gaps = 4/137 (3%)
Strand=Plus/Minus
Query 439 AATAGTATATTACACTACAAGAGCAGAAAGT-TGAGATTCCTGCACTGCGGG-CATCATG 496
||||||||||||| ||||||| |||||||| || |||||||||||||| | ||| |||
Sbjct 77554 AATAGTATATTACGCTACAAGGGCAGAAAGGCTGGAATTCCTGCACTGCGCGACATGATG 77495
Query 497 GCACGCAGTTCAGG-GCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTA 555
| || | || ||| ||| ||||||||||||| | |||||||||||||||| ||
Sbjct 77494 CC-CGAGGCGAAGCCGCTTCCAACTTTCTGCCCATGTGGCGTATACTATTTTTCTTTATA 77436
Query 556 TGCGGTCGAAAGTACGT 572
|||||||||||||||
Sbjct 77435 CCCGGTCGAAAGTACGT 77419
>seq330
Length=594061
Score = 91.5 bits (100), Expect = 2e-14
Identities = 67/75 (89%), Gaps = 5/75 (7%)
Strand=Plus/Minus
Query 596 GATGCCTGCCCCCGACATTTGCG-GCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 654
|||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 183096 GATGCCTGCCCC-GACATTTGCCAGCACGAGCGAAGCGAGTGCTGCTGGTC---GGGGGC 183041
Query 655 AGGCATCAAATACAC 669
||||||| || ||||
Sbjct 183040 AGGCATCGAAAACAC 183026
>seq46
Length=408841
Score = 91.5 bits (100), Expect = 2e-14
Identities = 69/78 (88%), Gaps = 5/78 (6%)
Strand=Plus/Minus
Query 596 GATGCCTGCCCCCGACATTTGCG-GCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 654
|||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 264125 GATGCCTGCCCC-GACATTTGCCAGCACGAGCGAAGCGAGTGCTGCTGGTC---GGGGGC 264070
Query 655 AGGCATCAAATACACCTG 672
||||||| || |||| ||
Sbjct 264069 AGGCATCGAAAACACATG 264052
>seq668
Length=11091
Score = 89.7 bits (98), Expect = 7e-14
Identities = 104/138 (75%), Gaps = 13/138 (9%)
Strand=Plus/Plus
Query 441 TAGTATATTACACTACAAGAGCAGAAAG-TTGAGATTCCTGCACTGCGGG-CATCATGGC 498
||||||||||| ||||||| |||||||| ||| |||||||||||||| | ||| ||| |
Sbjct 7944 TAGTATATTACGCTACAAGGGCAGAAAGGTTGGAATTCCTGCACTGCGCGACATGATGCC 8003
Query 499 ACGCAGTTCAGGGCT---CTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTA 555
|| ||| | || ||| ||||||||| | ||||||||||||||| ||
Sbjct 8004 --------CAAGGCGAAGCCGAACTTTTTGCCCATGTGGAATATACTATTTTTCTTTATA 8055
Query 556 TGCGGTCGAAAGTACGTT 573
|||||||||||| |||
Sbjct 8056 CTCGGTCGAAAGTATGTT 8073
>seq3797
Length=761821
Score = 84.2 bits (92), Expect = 3e-12
Identities = 94/124 (76%), Gaps = 5/124 (4%)
Strand=Plus/Plus
Query 450 ACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGG---CAT--CATGGCACGCAG 504
|| ||||||| |||||||| | |||||||||||||| || ||| | |||||
Sbjct 627855 ACGCTACAAGGGCAGAAAGACGGAATTCCTGCACTGCGCAGTACAGTACATATCGCGCAG 627914
Query 505 TTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTATGCGGTCGA 564
| ||||||| ||| ||| || |||||| | ||||||||||||||| || |||||||
Sbjct 627915 TACAGGGCTTCCAACTTTTTGTCCATGTGGCTTATACTATTTTTCTTTATACCCGGTCGA 627974
Query 565 AAGT 568
||||
Sbjct 627975 AAGT 627978
Score = 82.4 bits (90), Expect = 1e-11
Identities = 65/75 (87%), Gaps = 5/75 (7%)
Strand=Plus/Plus
Query 596 GATGCCTGCCCCCGACATTTG-CGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 654
|||||||| |||||||||||| | ||||||||| |||||||||||| |||| ||||||
Sbjct 739444 GATGCCTG-CCCCGACATTTGCCAGCACGAGCGGAGCGAGTGCTGCGGGTC---GGGGGC 739499
Query 655 AGGCATCAAATACAC 669
||||||| || ||||
Sbjct 739500 AGGCATCGAAAACAC 739514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 68319319583856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |