Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_006645.1 Length=21388 Score E Sequences producing significant alignments: (Bits) Value seq4860 111 2e-20 seq330 91.5 2e-14 seq46 91.5 2e-14 seq668 89.7 7e-14 seq3797 84.2 3e-12 >seq4860 Length=83171 Score = 111 bits (122), Expect = 2e-20 Identities = 110/137 (80%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 439 AATAGTATATTACACTACAAGAGCAGAAAGT-TGAGATTCCTGCACTGCGGG-CATCATG 496 ||||||||||||| ||||||| |||||||| || |||||||||||||| | ||| ||| Sbjct 77554 AATAGTATATTACGCTACAAGGGCAGAAAGGCTGGAATTCCTGCACTGCGCGACATGATG 77495 Query 497 GCACGCAGTTCAGG-GCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTA 555 | || | || ||| ||| ||||||||||||| | |||||||||||||||| || Sbjct 77494 CC-CGAGGCGAAGCCGCTTCCAACTTTCTGCCCATGTGGCGTATACTATTTTTCTTTATA 77436 Query 556 TGCGGTCGAAAGTACGT 572 ||||||||||||||| Sbjct 77435 CCCGGTCGAAAGTACGT 77419 >seq330 Length=594061 Score = 91.5 bits (100), Expect = 2e-14 Identities = 67/75 (89%), Gaps = 5/75 (7%) Strand=Plus/Minus Query 596 GATGCCTGCCCCCGACATTTGCG-GCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 654 |||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 183096 GATGCCTGCCCC-GACATTTGCCAGCACGAGCGAAGCGAGTGCTGCTGGTC---GGGGGC 183041 Query 655 AGGCATCAAATACAC 669 ||||||| || |||| Sbjct 183040 AGGCATCGAAAACAC 183026 >seq46 Length=408841 Score = 91.5 bits (100), Expect = 2e-14 Identities = 69/78 (88%), Gaps = 5/78 (6%) Strand=Plus/Minus Query 596 GATGCCTGCCCCCGACATTTGCG-GCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 654 |||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 264125 GATGCCTGCCCC-GACATTTGCCAGCACGAGCGAAGCGAGTGCTGCTGGTC---GGGGGC 264070 Query 655 AGGCATCAAATACACCTG 672 ||||||| || |||| || Sbjct 264069 AGGCATCGAAAACACATG 264052 >seq668 Length=11091 Score = 89.7 bits (98), Expect = 7e-14 Identities = 104/138 (75%), Gaps = 13/138 (9%) Strand=Plus/Plus Query 441 TAGTATATTACACTACAAGAGCAGAAAG-TTGAGATTCCTGCACTGCGGG-CATCATGGC 498 ||||||||||| ||||||| |||||||| ||| |||||||||||||| | ||| ||| | Sbjct 7944 TAGTATATTACGCTACAAGGGCAGAAAGGTTGGAATTCCTGCACTGCGCGACATGATGCC 8003 Query 499 ACGCAGTTCAGGGCT---CTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTA 555 || ||| | || ||| ||||||||| | ||||||||||||||| || Sbjct 8004 --------CAAGGCGAAGCCGAACTTTTTGCCCATGTGGAATATACTATTTTTCTTTATA 8055 Query 556 TGCGGTCGAAAGTACGTT 573 |||||||||||| ||| Sbjct 8056 CTCGGTCGAAAGTATGTT 8073 >seq3797 Length=761821 Score = 84.2 bits (92), Expect = 3e-12 Identities = 94/124 (76%), Gaps = 5/124 (4%) Strand=Plus/Plus Query 450 ACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGG---CAT--CATGGCACGCAG 504 || ||||||| |||||||| | |||||||||||||| || ||| | ||||| Sbjct 627855 ACGCTACAAGGGCAGAAAGACGGAATTCCTGCACTGCGCAGTACAGTACATATCGCGCAG 627914 Query 505 TTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTATGCGGTCGA 564 | ||||||| ||| ||| || |||||| | ||||||||||||||| || ||||||| Sbjct 627915 TACAGGGCTTCCAACTTTTTGTCCATGTGGCTTATACTATTTTTCTTTATACCCGGTCGA 627974 Query 565 AAGT 568 |||| Sbjct 627975 AAGT 627978 Score = 82.4 bits (90), Expect = 1e-11 Identities = 65/75 (87%), Gaps = 5/75 (7%) Strand=Plus/Plus Query 596 GATGCCTGCCCCCGACATTTG-CGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 654 |||||||| |||||||||||| | ||||||||| |||||||||||| |||| |||||| Sbjct 739444 GATGCCTG-CCCCGACATTTGCCAGCACGAGCGGAGCGAGTGCTGCGGGTC---GGGGGC 739499 Query 655 AGGCATCAAATACAC 669 ||||||| || |||| Sbjct 739500 AGGCATCGAAAACAC 739514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 68319319583856