Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_006651.1 Length=19161 Score E Sequences producing significant alignments: (Bits) Value seq4860 114 2e-21 seq3990 113 6e-21 seq3797 105 8e-19 seq4046 102 1e-17 seq668 96.9 4e-16 seq46 89.7 6e-14 seq330 87.8 2e-13 >seq4860 Length=83171 Score = 114 bits (126), Expect = 2e-21 Identities = 120/162 (74%), Gaps = 28/162 (17%) Strand=Plus/Minus Query 3463 AATAGTATATTACACTACAAGGGCAGAAA-GTTGAGATTCCTGCACTGCGCGCCATG-TG 3520 ||||||||||||| ||||||||||||||| | || |||||||||||||||| |||| || Sbjct 77554 AATAGTATATTACGCTACAAGGGCAGAAAGGCTGGAATTCCTGCACTGCGCGACATGATG 77495 Query 3521 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCAT 3580 |||||||||||||| ||| ||| ||||||||||| Sbjct 77494 CCCGAGGCGAAGCC--------------------------GCTTCCAACTTTCTGCCCAT 77461 Query 3581 GTAGTGTATACTATTTTTCTTGCTATGCGGTCGAAAGTACGT 3622 || | |||||||||||||||| || ||||||||||||||| Sbjct 77460 GTGGCGTATACTATTTTTCTTTATACCCGGTCGAAAGTACGT 77419 Score = 105 bits (116), Expect = 8e-19 Identities = 117/162 (72%), Gaps = 27/162 (17%) Strand=Plus/Minus Query 4353 AATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGTGCCAT-ATG 4411 ||||||||||||| |||||||||||||||| || |||||||||||||| | ||| ||| Sbjct 77554 AATAGTATATTACGCTACAAGGGCAGAAAGGCTGGAATTCCTGCACTGCGCGACATGATG 77495 Query 4412 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCAT 4471 |||||||||||||| ||| ||| ||||||||||| Sbjct 77494 CCCGAGGCGAAGCC--------------------------GCTTCCAACTTTCTGCCCAT 77461 Query 4472 GTAGTGTATACTAGTTTTCTTACGATGCGGTCGAAAGTACGT 4513 || | |||||||| ||||||| | ||||||||||||||| Sbjct 77460 GTGGCGTATACTATTTTTCTTTATACCCGGTCGAAAGTACGT 77419 >seq3990 Length=13867 Score = 113 bits (124), Expect = 6e-21 Identities = 93/111 (84%), Gaps = 2/111 (2%) Strand=Plus/Plus Query 3463 AATAGTATATTACACTACAAGGGCAGAAA-GTTGAGATTCCTGCACTGCGCGCCATG-TG 3520 ||||||||||||| ||||||||||||||| | || |||||||||||||||| |||| || Sbjct 3456 AATAGTATATTACGCTACAAGGGCAGAAAGGCTGGAATTCCTGCACTGCGCGACATGATG 3515 Query 3521 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATT 3571 ||| ||||||||||||| |||||| | || ||| ||||||| ||| || Sbjct 3516 CCCAAGGCGAAGCCGAGAACATCATATCGCGTAGTACAGGGCTTCCAACTT 3566 Score = 111 bits (122), Expect = 2e-20 Identities = 92/111 (83%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 4353 AATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGTGCCAT-ATG 4411 ||||||||||||| |||||||||||||||| || |||||||||||||| | ||| ||| Sbjct 3456 AATAGTATATTACGCTACAAGGGCAGAAAGGCTGGAATTCCTGCACTGCGCGACATGATG 3515 Query 4412 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATT 4462 ||| ||||||||||||| |||||| | || ||| ||||||| ||| || Sbjct 3516 CCCAAGGCGAAGCCGAGAACATCATATCGCGTAGTACAGGGCTTCCAACTT 3566 >seq3797 Length=761821 Score = 105 bits (116), Expect = 8e-19 Identities = 102/130 (78%), Gaps = 12/130 (9%) Strand=Plus/Plus Query 3463 AATAGTATATTACACTACAAGGGCAGAAA-GTTGAGATTCCTGCACTGCGCGCCATG-TG 3520 ||||||||||||| ||||||||||||||| |||| |||| |||||||| || |||| || Sbjct 739110 AATAGTATATTACGCTACAAGGGCAGAAAGGTTGGAATTCATGCACTGCACGACATGATG 739169 Query 3521 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCAT 3580 |||||||||||||||| | |||||| ||||||| ||| ||| |||| || Sbjct 739170 CCCGAGGCGAAGCCGA----------TCGCGCAGTACAGGGCTTCCAACTTTTTGCCTAT 739219 Query 3581 GTAGTGTATA 3590 || | ||||| Sbjct 739220 GTGGAGTATA 739229 Score = 105 bits (116), Expect = 8e-19 Identities = 101/130 (78%), Gaps = 11/130 (8%) Strand=Plus/Plus Query 4353 AATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGTGCCAT-ATG 4411 ||||||||||||| |||||||||||||||| ||| |||| |||||||| | ||| ||| Sbjct 739110 AATAGTATATTACGCTACAAGGGCAGAAAGGTTGGAATTCATGCACTGCACGACATGATG 739169 Query 4412 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCAT 4471 |||||||||||||||| | |||||| ||||||| ||| ||| |||| || Sbjct 739170 CCCGAGGCGAAGCCGA----------TCGCGCAGTACAGGGCTTCCAACTTTTTGCCTAT 739219 Query 4472 GTAGTGTATA 4481 || | ||||| Sbjct 739220 GTGGAGTATA 739229 >seq4046 Length=3673754 Score = 102 bits (112), Expect = 1e-17 Identities = 86/102 (84%), Gaps = 4/102 (4%) Strand=Plus/Plus Query 4355 TAGTATATTACACTACAAGGGCAGAAA-GTTTGAGATTCCTGCACTGCGTGCCAT-ATGC 4412 ||||||||||| ||||| ||||||||| || || |||||||||||||||| ||| |||| Sbjct 3548077 TAGTATATTACGCTACACGGGCAGAAAGGTATGGAATTCCTGCACTGCGTGACATGATGC 3548136 Query 4413 CCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCT 4454 |||||||| |||||| ||||||| | |||||| |||| || Sbjct 3548137 CCGAGGCGTAGCCGA--GCATCATATCGCGCAGTACAGGTCT 3548176 Score = 95.1 bits (104), Expect = 1e-15 Identities = 84/102 (82%), Gaps = 5/102 (5%) Strand=Plus/Plus Query 3465 TAGTATATTACACTACAAGGGCAGAAAG--TTGAGATTCCTGCACTGCGCGCCATG-TGC 3521 ||||||||||| ||||| |||||||||| || |||||||||||||| | |||| ||| Sbjct 3548077 TAGTATATTACGCTACACGGGCAGAAAGGTATGGAATTCCTGCACTGCGTGACATGATGC 3548136 Query 3522 CCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCT 3563 |||||||| |||||| ||||||| | |||||| |||| || Sbjct 3548137 CCGAGGCGTAGCCGA--GCATCATATCGCGCAGTACAGGTCT 3548176 >seq668 Length=11091 Score = 96.9 bits (106), Expect = 4e-16 Identities = 69/78 (88%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 4351 GAAATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGTGCCAT-A 4409 ||| ||||||||||| |||||||||||||||| ||| |||||||||||||| | ||| | Sbjct 7940 GAATTAGTATATTACGCTACAAGGGCAGAAAGGTTGGAATTCCTGCACTGCGCGACATGA 7999 Query 4410 TGCCCGAGGCGAAGCCGA 4427 ||||| |||||||||||| Sbjct 8000 TGCCCAAGGCGAAGCCGA 8017 Score = 96.9 bits (106), Expect = 4e-16 Identities = 69/77 (90%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 3462 AAATAGTATATTACACTACAAGGGCAGAAA-GTTGAGATTCCTGCACTGCGCGCCATG-T 3519 || ||||||||||| ||||||||||||||| |||| |||||||||||||||| |||| | Sbjct 7941 AATTAGTATATTACGCTACAAGGGCAGAAAGGTTGGAATTCCTGCACTGCGCGACATGAT 8000 Query 3520 GCCCGAGGCGAAGCCGA 3536 |||| |||||||||||| Sbjct 8001 GCCCAAGGCGAAGCCGA 8017 >seq46 Length=408841 Score = 89.7 bits (98), Expect = 6e-14 Identities = 68/77 (88%), Gaps = 4/77 (5%) Strand=Plus/Minus Query 4537 GATGCCTGCCCCCGACATTTGCG-GCACGAGCGAAGCGAGTGCTGCTGGTCgggggggCA 4595 |||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct 264125 GATGCCTGCCCC-GACATTTGCCAGCACGAGCGAAGCGAGTGCTGCTGGTC--GGGGGCA 264069 Query 4596 GGCATTAAATACACCTG 4612 ||||| || |||| || Sbjct 264068 GGCATCGAAAACACATG 264052 >seq330 Length=594061 Score = 87.8 bits (96), Expect = 2e-13 Identities = 66/74 (89%), Gaps = 4/74 (5%) Strand=Plus/Minus Query 4537 GATGCCTGCCCCCGACATTTGCG-GCACGAGCGAAGCGAGTGCTGCTGGTCgggggggCA 4595 |||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct 183096 GATGCCTGCCCC-GACATTTGCCAGCACGAGCGAAGCGAGTGCTGCTGGTC--GGGGGCA 183040 Query 4596 GGCATTAAATACAC 4609 ||||| || |||| Sbjct 183039 GGCATCGAAAACAC 183026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 61193324327744