Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_006661.1 Length=11186 Score E Sequences producing significant alignments: (Bits) Value seq2387 161 7e-36 seq3401 159 2e-35 seq3484 136 3e-28 seq813 87.8 1e-13 >seq2387 Length=144888 Score = 161 bits (178), Expect = 7e-36 Identities = 147/183 (80%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 10983 CTGCGGTAAACGAAATTGCCACATTCCGGCTACGTCGGGCAGAAAAATAGTATACACACC 11042 ||||| ||||||| || || | ||||||| ||||| ||| | || || |||||||||| Sbjct 139815 CTGCGCGAAACGAACTTACCGCTTTCCGGCACCGTCGAGCAAACAAGTAATATACACACC 139756 Query 11043 TTGGCCAGTAAAAAGTAAACCCTCAGACCACATGTTTGTCAACCTCGACTTCACCTCGGC 11102 | ||| |||||||| ||| ||||||| ||||||||| | ||||| ||| |||| | Sbjct 139755 TGGGCT-GTAAAAAG-AAAGCCTCAGATCACATGTTTATTGACCTCAGCTTTGACTCGAC 139698 Query 11103 CAACAATCACATGTGATCTGAGACtttttttATTTTACTGGCCTAGGTATGTGATATACT 11162 | ||||| | |||||||||||||| ||| |||||||||||||||| |||||| || |||| Sbjct 139697 CGACAATTAAATGTGATCTGAGACATTTCTTATTTTACTGGCCTANGTATGTAATCTACT 139638 Query 11163 ATT 11165 ||| Sbjct 139637 ATT 139635 Score = 113 bits (124), Expect = 3e-21 Identities = 97/118 (82%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 6714 TACCTAGGGCAATAAAGTAAGAAATGTCTCAGATCACATGTAATTGTTTACTGAGGCGAA 6773 ||| |||| || |||| |||||||||||||||||||||| ||||||| ||| | || Sbjct 139649 TACNTAGGCCAGTAAAATAAGAAATGTCTCAGATCACATTTAATTGTCGGTCGAGTCAAA 139708 Query 6774 GCCGAGGTCAACAAACATGTGGTCTGAGGCTTTCTTATTTACTGTCCAAGATTTGTAT 6831 || |||||||| ||||||||| |||||||||||||| ||||| | || || | ||||| Sbjct 139709 GCTGAGGTCAATAAACATGTGATCTGAGGCTTTCTT-TTTACAG-CCCAGGTGTGTAT 139764 >seq3401 Length=10799 Score = 159 bits (176), Expect = 2e-35 Identities = 146/183 (80%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 10983 CTGCGGTAAACGAAATTGCCACATTCCGGCTACGTCGGGCAGAAAAATAGTATACACACC 11042 ||||| ||||||| || || | ||||||| ||||| ||| | || || |||||||||| Sbjct 1598 CTGCGCGAAACGAACTTACCGCTTTCCGGCACCGTCGAGCAAACAAGTAATATACACACC 1657 Query 11043 TTGGCCAGTAAAAAGTAAACCCTCAGACCACATGTTTGTCAACCTCGACTTCACCTCGGC 11102 | ||| ||||||| ||| ||||||| ||||||||| | ||||| ||| |||| | Sbjct 1658 TGGGCT-GTAAAAAAGAAAGCCTCAGATCACATGTTTATTGACCTCAGCTTTGACTCGAC 1716 Query 11103 CAACAATCACATGTGATCTGAGACtttttttATTTTACTGGCCTAGGTATGTGATATACT 11162 | ||||| | |||||||||||||| ||| |||||||||||||||| |||||| || |||| Sbjct 1717 CGACAATTAAATGTGATCTGAGACATTTCTTATTTTACTGGCCTACGTATGTAATCTACT 1776 Query 11163 ATT 11165 ||| Sbjct 1777 ATT 1779 Score = 114 bits (126), Expect = 9e-22 Identities = 97/118 (82%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 6714 TACCTAGGGCAATAAAGTAAGAAATGTCTCAGATCACATGTAATTGTTTACTGAGGCGAA 6773 ||| |||| || |||| |||||||||||||||||||||| ||||||| ||| | || Sbjct 1765 TACGTAGGCCAGTAAAATAAGAAATGTCTCAGATCACATTTAATTGTCGGTCGAGTCAAA 1706 Query 6774 GCCGAGGTCAACAAACATGTGGTCTGAGGCTTTCTTATTTACTGTCCAAGATTTGTAT 6831 || |||||||| ||||||||| |||||||||||||| ||||| | || || | ||||| Sbjct 1705 GCTGAGGTCAATAAACATGTGATCTGAGGCTTTCTTTTTTACAG-CCCAGGTGTGTAT 1649 >seq3484 Length=4033909 Score = 136 bits (150), Expect = 3e-28 Identities = 137/180 (76%), Gaps = 11/180 (6%) Strand=Plus/Plus Query 10983 CTGCGGTAAACGAAATTGCCACATTCCGGCTACGTCGGGCAGAAAAATAGTATACACACC 11042 ||||| ||||||| ||||| | ||||||| ||||| | | |||| ||||||| |||| Sbjct 105496 CTGCGTAAAACGAAGTTGCCGCTTTCCGGCACCGTCGAGGAACAAAACAGTATACGCACC 105555 Query 11043 TTGGCCAGTAAAAAGTAAACCCTCAGACCACATGTTTGTCAACCTCGACTTCACCTCGGC 11102 | |||||||||||| ||| ||||||| ||| ||||| || || ||| | Sbjct 105556 TGGGCCAGTAAAAAAGAAAGCCTCAGATCACCTGTTT-----------ATTGACTTCGAC 105604 Query 11103 CAACAATCACATGTGATCTGAGACtttttttATTTTACTGGCCTAGGTATGTGATATACT 11162 | ||||| ||||||| ||||||| ||| |||||||||||| |||||||||| || |||| Sbjct 105605 CGACAATTACATGTGTTCTGAGAGATTTATTATTTTACTGGTCTAGGTATGTAATCTACT 105664 Score = 84.2 bits (92), Expect = 2e-12 Identities = 94/126 (75%), Gaps = 11/126 (9%) Strand=Plus/Minus Query 6714 TACCTAGGGCAATAAAGTAAGAAATGTCTCAGATCACATGTAATTGTTTACTGAGGCGAA 6773 ||||||| || |||| ||| |||| ||||||| ||||||||||||| || Sbjct 105653 TACCTAGACCAGTAAAATAATAAATCTCTCAGAACACATGTAATTGT---------CG-- 105605 Query 6774 GCCGAGGTCAACAAACATGTGGTCTGAGGCTTTCTTATTTACTGTCCAAGATTTGTATGC 6833 | ||| ||||| ||||| ||| |||||||||||||| ||||||| || || | |||| | Sbjct 105604 GTCGAAGTCAATAAACAGGTGATCTGAGGCTTTCTTTTTTACTGGCCCAGGTGCGTATAC 105545 Query 6834 GATTTT 6839 |||| Sbjct 105544 TGTTTT 105539 >seq813 Length=2416146 Score = 87.8 bits (96), Expect = 1e-13 Identities = 120/166 (72%), Gaps = 5/166 (3%) Strand=Plus/Minus Query 11002 CACATTCCGGCTACGTCGGGCA-GAAAAATAGTATACACACCTTGGCCAGTAA-AAAGTA 11059 ||| ||||| |||| | ||||| | ||||| | ||||||||| | | || |||| Sbjct 2393691 CACTTTCCGACTAC-TGGGGCATGTAAAATCGCATACACACCACGTCTGCGAACAAAG-- 2393635 Query 11060 AACCCTCAGACCACATGTTTGTCAACCTCGACTTCACCTCGGCCAACAATCACATGTGAT 11119 || ||||| | |||||||| || ||||| |||| ||| || | | | ||| Sbjct 2393634 AATGTTCAGATCGCATGTTTGCCACCCTCGGCTTCGCCTAGGGCGAAANNNNNNNNNGAT 2393575 Query 11120 CTGAGACtttttttATTTTACTGGCCTAGGTATGTGATATACTATT 11165 ||| ||| || |||||||| | ||||||||||||| |||||||||| Sbjct 2393574 CTGGGACATTCTTTATTTTCCAGGCCTAGGTATGTAATATACTATT 2393529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35678028323200