Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_006662.1 Length=17477 Score E Sequences producing significant alignments: (Bits) Value seq3990 120 3e-23 seq4860 118 1e-22 seq3797 105 7e-19 seq4046 98.7 1e-16 seq668 96.9 4e-16 seq330 91.5 2e-14 seq46 91.5 2e-14 >seq3990 Length=13867 Score = 120 bits (132), Expect = 3e-23 Identities = 94/111 (85%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 4752 AATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-ATG 4810 ||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||| ||| Sbjct 3456 AATAGTATATTACGCTACAAGGGCAGAAAGGCTGGAATTCCTGCACTGCGCGACATGATG 3515 Query 4811 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATT 4861 ||| ||||||||||||| |||||| | || ||| ||||||| ||| || Sbjct 3516 CCCAAGGCGAAGCCGAGAACATCATATCGCGTAGTACAGGGCTTCCAACTT 3566 >seq4860 Length=83171 Score = 118 bits (130), Expect = 1e-22 Identities = 120/162 (74%), Gaps = 27/162 (17%) Strand=Plus/Minus Query 4752 AATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-ATG 4810 ||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||| ||| Sbjct 77554 AATAGTATATTACGCTACAAGGGCAGAAAGGCTGGAATTCCTGCACTGCGCGACATGATG 77495 Query 4811 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCAT 4870 |||||||||||||| ||| ||| ||||||||||| Sbjct 77494 CCCGAGGCGAAGCC--------------------------GCTTCCAACTTTCTGCCCAT 77461 Query 4871 GTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGT 4912 || | |||||||| ||||||| || ||||||||||||||| Sbjct 77460 GTGGCGTATACTATTTTTCTTTATACCCGGTCGAAAGTACGT 77419 >seq3797 Length=761821 Score = 105 bits (116), Expect = 7e-19 Identities = 101/130 (78%), Gaps = 11/130 (8%) Strand=Plus/Plus Query 4752 AATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-ATG 4810 ||||||||||||| |||||||||||||||| || |||| |||||||| || ||| ||| Sbjct 739110 AATAGTATATTACGCTACAAGGGCAGAAAGGTTGGAATTCATGCACTGCACGACATGATG 739169 Query 4811 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCAT 4870 |||||||||||||||| | |||||| ||||||| ||| ||| |||| || Sbjct 739170 CCCGAGGCGAAGCCGA----------TCGCGCAGTACAGGGCTTCCAACTTTTTGCCTAT 739219 Query 4871 GTAGTGTATA 4880 || | ||||| Sbjct 739220 GTGGAGTATA 739229 Score = 82.4 bits (90), Expect = 9e-12 Identities = 65/75 (87%), Gaps = 5/75 (7%) Strand=Plus/Plus Query 4936 GATGCCTGCCCCCGACATTTG-CGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 4994 |||||||| |||||||||||| | ||||||||| |||||||||||| |||| |||||| Sbjct 739444 GATGCCTG-CCCCGACATTTGCCAGCACGAGCGGAGCGAGTGCTGCGGGTC---GGGGGC 739499 Query 4995 AGGCATCAAATACAC 5009 ||||||| || |||| Sbjct 739500 AGGCATCGAAAACAC 739514 >seq4046 Length=3673754 Score = 98.7 bits (108), Expect = 1e-16 Identities = 85/102 (83%), Gaps = 4/102 (4%) Strand=Plus/Plus Query 4754 TAGTATATTACACTACAAGGGCAGAAA-GTCTGAGATTCCTGCACTGCGCGCCAT-ATGC 4811 ||||||||||| ||||| ||||||||| || || |||||||||||||| | ||| |||| Sbjct 3548077 TAGTATATTACGCTACACGGGCAGAAAGGTATGGAATTCCTGCACTGCGTGACATGATGC 3548136 Query 4812 CCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCT 4853 |||||||| |||||| ||||||| | |||||| |||| || Sbjct 3548137 CCGAGGCGTAGCCGA--GCATCATATCGCGCAGTACAGGTCT 3548176 >seq668 Length=11091 Score = 96.9 bits (106), Expect = 4e-16 Identities = 69/78 (88%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 4750 GAAATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-A 4808 ||| ||||||||||| |||||||||||||||| || |||||||||||||||| ||| | Sbjct 7940 GAATTAGTATATTACGCTACAAGGGCAGAAAGGTTGGAATTCCTGCACTGCGCGACATGA 7999 Query 4809 TGCCCGAGGCGAAGCCGA 4826 ||||| |||||||||||| Sbjct 8000 TGCCCAAGGCGAAGCCGA 8017 >seq330 Length=594061 Score = 91.5 bits (100), Expect = 2e-14 Identities = 67/75 (89%), Gaps = 5/75 (7%) Strand=Plus/Minus Query 4936 GATGCCTGCCCCCGACATTTGCG-GCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 4994 |||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 183096 GATGCCTGCCCC-GACATTTGCCAGCACGAGCGAAGCGAGTGCTGCTGGTC---GGGGGC 183041 Query 4995 AGGCATCAAATACAC 5009 ||||||| || |||| Sbjct 183040 AGGCATCGAAAACAC 183026 >seq46 Length=408841 Score = 91.5 bits (100), Expect = 2e-14 Identities = 69/78 (88%), Gaps = 5/78 (6%) Strand=Plus/Minus Query 4936 GATGCCTGCCCCCGACATTTGCG-GCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 4994 |||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 264125 GATGCCTGCCCC-GACATTTGCCAGCACGAGCGAAGCGAGTGCTGCTGGTC---GGGGGC 264070 Query 4995 AGGCATCAAATACACCTG 5012 ||||||| || |||| || Sbjct 264069 AGGCATCGAAAACACATG 264052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 55804830384640