Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq4696 179 5e-40 seq1332 122 1e-22 seq4429 91.5 2e-13 >seq4696 Length=9412112 Score = 179 bits (198), Expect = 5e-40 Identities = 315/456 (69%), Gaps = 2/456 (0%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || || || ||||||||||||| |||||||||||||||| |||||||| || | Sbjct 481928 TCAAATTCTTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACACATTAAACTC 481987 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63256 || | | ||| || |||| ||||| || | || || ||||| | ||| ||| || Sbjct 481988 CATTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAAGC-ATAGAA 482046 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 || ||||| | ||| | ||| || || ||||| |||||||| |||||||| || | | Sbjct 482047 AAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAGAAATTCGAA 482106 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 || |||| ||||||||||||||| || ||||| | ||||||| | |||||||| || Sbjct 482107 GATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACC 482166 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 ||||| | ||| | || |||||||| || ||||| | ||| |||| | ||| || || Sbjct 482167 TTGATCAACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGA 482226 Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63496 || || || || || || || | ||| |||| | ||| | || | ||| Sbjct 482227 TACGCCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAACC 482286 Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556 || || || || ||| || ||| || |||| || | || ||||| || || || Sbjct 482287 AATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATAAATTCCTTC 482346 Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63592 || || || || |||| |||| || ||||| || Sbjct 482347 AATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 482382 Score = 158 bits (174), Expect = 2e-33 Identities = 271/391 (69%), Gaps = 7/391 (2%) Strand=Plus/Plus Query 62109 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62168 ||||| || | ||| | ||| ||| ||||| |||||||| || | || ||||||||| Sbjct 480659 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 480718 Query 62169 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 62228 || | || |||||||| | ||| ||||| | ||||| || | | ||| | || || Sbjct 480719 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCC 480778 Query 62229 GGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 62285 |||| ||| | ||||||| || || | ||| || || |||||| ||||| Sbjct 480779 GGAATCCTTGCAAGGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 480838 Query 62286 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 62345 || | ||| | | || || || ||| || | | | ||| ||||| || ||||| ||| Sbjct 480839 TCGTCCCACAGATCCCTGTCTGTCAAATCTTTCAACAAATGAGGATTGACGACTTGGAAT 480898 Query 62346 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTA 62405 |||||||| | || | || |||||||| || || || || || || | ||| || || Sbjct 480899 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 480958 Query 62406 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62465 || ||||||||||| || || || || || ||||| || || | || ||| ||| | | Sbjct 480959 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 481018 Query 62466 AGACCGTATGTTCTG--ATTTTATCTTTTAG 62494 | || |||||||| |||||| |||| || Sbjct 481019 ACGCC--ATGTTCTGCAATTTTAGCTTTCAG 481047 Score = 82.4 bits (90), Expect = 1e-10 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 63957 CTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATG 64016 || |||| ||| || ||||| ||||||| ||| ||||| ||||||||||| |||||||| Sbjct 482905 CTGAATACTTTCTTGGTTTCTTTGTGTAAATTGGATACTGCTATTCTGGCTGCTAGAATA 482964 Query 64017 GCATAATCCG 64026 |||||||||| Sbjct 482965 GCATAATCCG 482974 >seq1332 Length=421543 Score = 122 bits (134), Expect = 1e-22 Identities = 133/174 (76%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 62274 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 62333 || || || ||||||| ||| | ||||||| |||||| | | | | ||| |||||| Sbjct 277243 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277184 Query 62334 ACTA-CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTC 62392 || | | |||| |||||| ||||| || | | ||||||||||||||| || || || || Sbjct 277183 ACAATCATGAA-TTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTC 277125 Query 62393 CACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 62446 ||| || ||||| |||||||| || ||||| || || || |||||||| ||||| Sbjct 277124 CACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTCGGCATTGGTGC 277071 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 62877 ACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 62936 |||||||| || | |||| ||||| | |||||| || ||||| ||||| | | | Sbjct 276467 ACAAACATATTAACAGCAATGGATGCTAAATTACATACTGCTACTTCATTTGGAGAAGAG 276408 Query 62937 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTA 62996 |||||||| || |||||||| | |||||| | || |||||||| | |||||||||||| Sbjct 276407 TATTGTATAATTTCAGTGCATAAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATTT 276348 Query 62997 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 63056 || || || | ||| ||||| || || | ||||| |||||||||| || | | Sbjct 276347 GATTTAAGATTGCAGGGATCTTTATAGAGCATATAAGGAGTTCCAGTTTCAACTTGTGCT 276288 Query 63057 TCTATAATCGCTTTCCA 63073 | || ||| || |||| Sbjct 276287 TTTAAAATTGCAGTCCA 276271 >seq4429 Length=4547816 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 33595 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 33654 |||||||| || ||||||||||||||||||| ||| || || ||||| || | |||||| Sbjct 2612758 TACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAGCCATAGAAGCAACGAGCCTCA 2612699 Query 33655 GTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTG 33714 || | ||| ||||| | || || || ||| ||| ||||| || || || || | Sbjct 2612698 GTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTCTCATTGACAATACCATCTGAG 2612639 Query 33715 GCTGCAAAAAACGCCAATACATG 33737 || || || || ||||| ||||| Sbjct 2612638 GCAGCGAAGAATGCCAAAACATG 2612616 Score = 84.2 bits (92), Expect = 3e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 33799 TCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCA 33858 ||||||||||||||||||||||| || || || || ||||| ||||||| ||| ||||| Sbjct 2612468 TCTACTTCTTCCACTGTCCAAAACGAAGCTTCGGCTTTTTTGTACATGTGCCAAATGTCG 2612409 Query 33859 TAATATTGGATTGGGAAAATAACAAATCT 33887 |||||||||| || | |||||||| Sbjct 2612408 GGCCATTGGATTGGAAACAATACAAATCT 2612380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622908951041920