Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq2005 107 2e-18 seq3620 104 2e-17 >seq2005 Length=1592806 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | || || | ||| || || |||||||| || ||||||||||| | Sbjct 905955 CCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAA 905896 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| |||| || |||||||| || ||| | ||||| ||||| ||||| ||| Sbjct 905895 AGGGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGAGGA 905836 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || |||||||| ||||| ||| || || | | | |||||| || ||| Sbjct 905835 ATTCCTTCTTTGTCCTGAATTTTGGCT--TTAACATTTTCAATGGTGTCGGAGGCCTCTA 905778 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||| || ||||| || || ||||| |||||||| ||||| |||||| Sbjct 905777 CTTCCAGAGTAATGGTCTTGCCAGTCAGAGTTTTGACGAAAATTTGCATT 905728 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | ||||||| ||| ||||||||||| ||||| ||||||||||| | Sbjct 906183 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906124 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||||| ||||| || ||| | || || ||||| ||||| || Sbjct 906123 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906064 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || || || ||||| ||| || || | | | ||||||| | || Sbjct 906063 ATGCCTTCCTTATCCTGAATTTTAGCT--TTGACGTTTTCGATAGTGTCGGAAGCTTCAA 906006 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||| | ||| |||||||| ||||| | |||||||| ||||| |||||| Sbjct 906005 CTTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATTTGCATT 905956 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| ||| | |||||||||||||| ||||||||||| | Sbjct 906411 CCTCCGCGAAGACGCAAGACCAAATGTAAGGTGGACTCCTTTTGGATGTTGTAGTCTGAA 906352 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||||| ||||| || ||| | || || ||||| ||||| || Sbjct 906351 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906292 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || || || ||||| ||| || || | | | ||||||| | || Sbjct 906291 ATGCCTTCCTTATCCTGAATTTTAGCT--TTGACGTTTTCGATAGTGTCGGAAGCTTCAA 906234 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||| | ||| |||||||| ||||| | |||||||| |||||||||||| Sbjct 906233 CTTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCATT 906184 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | || || | ||| || || || || ||||| |||||||| || | | Sbjct 905727 CCACCTCGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGATGTTGTAATCAGAC 905668 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || | || |||| |||||| || ||| | || || || |||||||| ||| Sbjct 905667 AGGGTTCTGCCATCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAGGAGGG 905608 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| |||||||| ||| | ||| || || | | | ||| || | ||| Sbjct 905607 ATGCCTTCTTTGTCTTGAATCTTGGCT--TTGACATTTTCGATAGTATCAGAAGCCTCTA 905550 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || ||||| ||||| |||| |||||||||||||| ||||| Sbjct 905549 CTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCAT 905501 Score = 98.7 bits (108), Expect = 8e-16 Identities = 165/237 (70%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | ||| || || |||||||| || || |||||||| | Sbjct 904815 CCTCCACGGAGGCGCAAGACTAGATGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAA 904756 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || || |||||||| || ||| | ||||| ||||| || || ||| Sbjct 904755 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 904696 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| |||| ||| || || | | | ||||| || |||| Sbjct 904695 ATTCCCTCTTTGTCCTGGATTTTAGCT--TTGACATTTTCAATGGTGTCTGAGGCCTCCA 904638 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTAGC 16943 ||||| ||||||||||| || |||| ||||| ||||| |||||||| ||| ||| Sbjct 904637 CTTCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCATCTTGAAGC 904581 >seq3620 Length=288302 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || ||||| |||||||||||| || ||||||||||| ||||| | | Sbjct 90034 CCTCCACGAAGTCGCAATACCAAATGCAGCGTGGATTCTTTTTGTATGTTATAGTCTGAC 89975 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||| |||||||| || || | || | || ||| ||||| || Sbjct 89974 AATGTGCGCCCATCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGG 89915 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||||||||| ||||| |||||| | | | |||||| | ||| | Sbjct 89914 ATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAAGCCTCGACT 89855 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||||| || || || || || || || |||||||| Sbjct 89854 TCAAGTGTGATGGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCAT 89808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405063749406880