Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4696 185 1e-41 seq1332 122 1e-22 seq4429 89.7 7e-13 >seq4696 Length=9412112 Score = 185 bits (204), Expect = 1e-41 Identities = 316/456 (69%), Gaps = 2/456 (0%) Strand=Plus/Plus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 || || || ||||||||||||| | |||||||||||||| |||||||| || | Sbjct 481928 TCAAATTCTTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACACATTAAACTC 481987 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63111 || | | ||| || |||| ||||| || | || || ||||| | ||| ||| || Sbjct 481988 CATTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAAGC-ATAGAA 482046 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 || ||||| | ||| | ||| || || ||||| |||||||| |||||||| || | | Sbjct 482047 AAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAGAAATTCGAA 482106 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 || |||| ||||||||||||||| || ||||| | ||||||| | |||||||| || Sbjct 482107 GATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACC 482166 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 ||||| | ||| | || |||||||| || ||||| | ||| |||| | |||||| || Sbjct 482167 TTGATCAACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGA 482226 Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63351 | || || || || || || | ||| |||| | ||| | || | ||| Sbjct 482227 TACGCCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAACC 482286 Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 63411 || || || || ||| || ||| || |||| || | |||||||| || || || Sbjct 482287 AATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATAAATTCCTTC 482346 Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCT 63447 ||||| || || |||| |||| || ||||| || Sbjct 482347 AATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 482382 Score = 158 bits (174), Expect = 2e-33 Identities = 271/391 (69%), Gaps = 7/391 (2%) Strand=Plus/Plus Query 61964 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62023 ||||| || | ||| | ||| ||| ||||| |||||||| || | || ||||||||| Sbjct 480659 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 480718 Query 62024 TTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 62083 || | ||| |||||||| | ||| ||||| | ||||| || | | ||| | || || Sbjct 480719 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCC 480778 Query 62084 GGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 62140 |||| ||| | ||||||| || || | ||| || || |||||| ||||| Sbjct 480779 GGAATCCTTGCAAGGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 480838 Query 62141 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 62200 || | ||| | | || || || ||| || | | | ||| ||||| || ||||| ||| Sbjct 480839 TCGTCCCACAGATCCCTGTCTGTCAAATCTTTCAACAAATGAGGATTGACGACTTGGAAT 480898 Query 62201 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 62260 |||||||| | || | || |||||||| || || || || || || | || || || Sbjct 480899 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 480958 Query 62261 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62320 || ||||||||||| || || || || || ||||| || || | || ||| ||| | | Sbjct 480959 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 481018 Query 62321 AGACCGTATGTTCTG--ATTTTATCTTTTAG 62349 | || |||||||| |||||| |||| || Sbjct 481019 ACGCC--ATGTTCTGCAATTTTAGCTTTCAG 481047 Score = 82.4 bits (90), Expect = 1e-10 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 63812 CTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATG 63871 || |||| ||| || ||||||||||||| ||| ||||| |||||||| || |||||||| Sbjct 482905 CTGAATACTTTCTTGGTTTCTTTGTGTAAATTGGATACTGCTATTCTGGCTGCTAGAATA 482964 Query 63872 GCATAATCCG 63881 |||||||||| Sbjct 482965 GCATAATCCG 482974 >seq1332 Length=421543 Score = 122 bits (134), Expect = 1e-22 Identities = 133/174 (76%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 62129 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 62188 || || || ||||||| ||| | ||||||| |||||| | | | | ||| |||||| Sbjct 277243 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277184 Query 62189 ACTA-CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTC 62247 || | | |||| |||||| ||||| || | | ||||||||||||||| || || || || Sbjct 277183 ACAATCATGAA-TTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTC 277125 Query 62248 CACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 62301 ||| || ||||| |||||||| || ||||| || || || |||||||| ||||| Sbjct 277124 CACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTCGGCATTGGTGC 277071 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 62732 ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 62791 |||||||| || | |||| ||||| | |||||| || ||||| ||||| | | | Sbjct 276467 ACAAACATATTAACAGCAATGGATGCTAAATTACATACTGCTACTTCATTTGGAGAAGAG 276408 Query 62792 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 62851 |||||||| || |||||||| | |||||| | || || ||||| | |||||||||||| Sbjct 276407 TATTGTATAATTTCAGTGCATAAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATTT 276348 Query 62852 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 62911 || || || | ||| ||||| || || | ||||| |||||||||| || | | Sbjct 276347 GATTTAAGATTGCAGGGATCTTTATAGAGCATATAAGGAGTTCCAGTTTCAACTTGTGCT 276288 Query 62912 TCTATAATCGCTTTCCA 62928 | || ||| || |||| Sbjct 276287 TTTAAAATTGCAGTCCA 276271 >seq4429 Length=4547816 Score = 89.7 bits (98), Expect = 7e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 32931 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 32990 || || ||||| | ||| |||||||| || ||||||||||||||||||| || || Sbjct 2612779 TAGGTGTCAATGAGAAGGGAGTACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAG 2612720 Query 32991 CCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTT 33050 || |||||||| | |||||| || | ||| ||||| | || || || | | ||| Sbjct 2612719 CCATAGAAGCAACGAGCCTCAGTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTC 2612660 Query 33051 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 33094 ||||| || || || || ||| || || || ||||| ||||| Sbjct 2612659 TCATTGACAATACCATCTGAGGCAGCGAAGAATGCCAAAACATG 2612616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633593094995200