Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2005 114 1e-20 seq4696 111 2e-19 seq4429 109 6e-19 seq3484 107 2e-18 >seq2005 Length=1592806 Score = 114 bits (126), Expect = 1e-20 Identities = 73/77 (95%), Gaps = 2/77 (3%) Strand=Plus/Minus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326 |||||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| Sbjct 924117 AGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGAGCGTGG 924058 Query 126327 GTTCGAACCCCACACCT 126343 ||||||||||||||||| Sbjct 924057 GTTCGAACCCCACACCT 924041 >seq4696 Length=9412112 Score = 111 bits (122), Expect = 2e-19 Identities = 80/91 (88%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC-GGGAGCG 126323 || ||||||||||||| |||||||||||| |||||||| || |||||||| ||||||| Sbjct 4947920 AGCCAGGTTGGCCGAGCGGTCTAAGGCGCGGGATTTAAGCTCCTGTTCCCTCTGGGAGCG 4947979 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATT 126354 |||||||||| |||||||||| |||||| || Sbjct 4947980 TGGGTTCGAATCCCACACCTGGCAAATTTTT 4948010 >seq4429 Length=4547816 Score = 109 bits (120), Expect = 6e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 || ||||| || |||||||| || ||||||||||| ||||| |||||||||||||| | | Sbjct 2612477 TTGGAAAGGTCTACTTCTTCCACTGTCCAAAACGAAGCTTCGGCTTTTTTGTACATGTGC 2612418 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700 || ||||| | |||| |||||||| | ||||| | |||||| || || || | Sbjct 2612417 CAAATGTCGGGCCATTGGATTGGAAACAATACAAATCTTCCAGGGTTTTCCTTGAGAAGT 2612358 Query 93701 GGCTCTAGTTGTGGGTCAAA 93720 ||||| | |||||| ||||| Sbjct 2612357 GGCTCCAATTGTGGATCAAA 2612338 Score = 98.7 bits (108), Expect = 1e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| || || || | || || ||||||||||| || | || || || || | ||| Sbjct 2612782 ATGTAGGTGTCAATGAGAAGGGAGTACATTTCAGAGTGAATGTTTTCAATGGCCACCTGG 2612723 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || || ||||| || | ||| || || | ||||||||| || || | ||| || ||| Sbjct 2612722 AAGCCATAGAAGCAACGAGCCTCAGTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGA 2612663 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || |||||||| |||||||| || || || || || ||||| | |||| || || || Sbjct 2612662 TTCTCATTGACAATACCATCTGAGGCAGCGAAGAATGCCAAAACATGCGAGATGAAGTGC 2612603 Query 93542 TTCTCAT 93548 |||||| Sbjct 2612602 CTCTCAT 2612596 Score = 86.0 bits (94), Expect = 7e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 93116 TCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTG 93175 ||||| | || || | ||||||||||| || | || || | || || || ||||| Sbjct 2613106 TCGTCCCTAGAAATGAGTTCATTGCTGAAGGTAAGTCCAGGCATAAGACCACGCTTCTTC 2613047 Query 93176 AGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCC 93235 ||||| || || | ||| |||||||| ||||| || || || || || || || || Sbjct 2613046 AGCCAGAAAATGGCAGCGAAACTACCGCTGAAAAAGATTCCCTCGACTGCAGCGAAGGCA 2612987 Query 93236 ACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCT 93295 | | ||||||||||| | ||| || |||||||| || | ||||| | || Sbjct 2612986 ATCACTCGTTCGGCAAACGTCGCGCTATCGTGACTGATCCAGTTCAGGGCCCAGTTCGCC 2612927 Query 93296 TTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGG 93337 || || | ||| || ||||||||||| ||||| || ||| Sbjct 2612926 TTCTTGGCGACACAGGGAAGTGTTTCGATGGCGTTGAACAGG 2612885 >seq3484 Length=4033909 Score = 107 bits (118), Expect = 2e-18 Identities = 75/83 (90%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326 |||||||||||| |||||||||||||||| ||||| |||||||||| || |||||||||| Sbjct 3796209 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCGTCTGGGAGCGTGG 3796268 Query 126327 GTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||| | |||| Sbjct 3796269 GTTCGAACCCCACACTTAGCAAA 3796291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556826608746880