Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq2005 113 4e-20 seq3620 89.7 4e-13 >seq2005 Length=1592806 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||||||||| |||| || || |||||||| ||||| || | Sbjct 905501 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905560 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || | | | || ||| || ||| |||||||||||| | || || ||| Sbjct 905561 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905620 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || || | ||| || |||||| |||||||| | ||| || | ||||| || Sbjct 905621 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGATGGCAGAACCCTGTCTGATTACAAC 905680 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||||||||| ||||| ||| | || | ||||| || ||||| Sbjct 905681 ATCCAAAAAGAATCAACACTCCATCTTGTTCTTCGTCTTCGAGGTGG 905727 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||| ||||| |||| || |||||||| || |||| ||| | Sbjct 905273 ATGCAAATTTTTGTAAAAACTCTGACTGGTAAAACCATCACTCTGGAGGTTGAAGCATCA 905332 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | || ||| ||||| ||||||||||| | || |||||| Sbjct 905333 GATACCATTGAAAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 905392 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | || |||| || || || ||| |||||||| | ||| || | ||||| || Sbjct 905393 CAGCGTCTGATTTTCGCAGGAAAGCAACTGGAAGATGGAAGAACCCTGTCTGATTACAAC 905452 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || ||||||||||| || || ||| | || | ||||| || || |||| Sbjct 905453 ATCCAAAAAGAATCAACTCTCCATCTTGTTCTTCGTCTTCGAGGAGGCA 905501 Score = 84.2 bits (92), Expect = 2e-11 Identities = 165/244 (68%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 111170 TTTATAAGAGTTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCG 111229 ||||| || || || ||||| || ||||| ||||| |||| ||||||||||| || Sbjct 904572 TTTATTTCAGCTTCAAGATGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTC 904631 Query 111230 TGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAG 111289 ||||| ||| || || | ||| | || ||| ||||| |||||||| | Sbjct 904632 TGGAAGTGGAGGCCTCAGACACCATTGAAAATGTCAAAGCTAAAATCCAGGACAAAGAGG 904691 Query 111290 GCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAA 111349 | |||| ||||| || | ||||| | ||| || |||||||| |||||| | Sbjct 904692 GAATTCCTCCAGATCAGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTA 904751 Query 111350 CTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCG 111409 || | | || || ||||| || || || || || || ||| |||| ||||| || || | Sbjct 904752 CTCTTTCTGACTACAATATTCAGAAGGAGTCAACTCTTCATCTAGTCTTGCGCCTCCGTG 904811 Query 111410 GTGG 111413 | || Sbjct 904812 GAGG 904815 >seq3620 Length=288302 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||| || ||| | || |||||||| ||||| ||||| ||| | Sbjct 89580 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89639 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | || || || ||| ||||||||||| ||||| ||||| Sbjct 89640 GATACGATTGAGAATGTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCCCCAGATCAG 89699 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || ||||| |||| ||| || || ||| | |||||| || || | || || || Sbjct 89700 CAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACAAC 89759 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| ||||| ||||| || | || | || || |||||||| Sbjct 89760 ATTCAAAAGGAATCCACACTTCACCTTGTACTTCGACTTCGCGGTGG 89806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423014674710400