Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq2005 129 4e-25 seq3620 93.3 3e-14 >seq2005 Length=1592806 Score = 129 bits (142), Expect = 4e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| |||||||||| || || || ||||||||| |||| ||||| | Sbjct 904816 AATGCAAATCTTTGTTAAAACATTGACTGGAAAGACCATTACCCTGGAGGTTGAAGCTTC 904875 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| || | | || | || || || || ||||| || | ||| |||| Sbjct 904876 AGACACAATTGAAAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCTGACCA 904935 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||| | |||||||||||||||||||| || |||||| | ||| | | |||||||| Sbjct 904936 ACAGCGTCTTATCTTTGCTGGCAAACAGCTGGAAGATGGACGTACTCTTTCTGATTACAA 904995 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 |||||| || || ||||||||||| |||| | ||| || |||||||| Sbjct 904996 TATTCAAAAAGAGTCTACTCTTCACTTGGTCCTGCGTCTAAGAGGAGGA 905044 Score = 125 bits (138), Expect = 5e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||| ||||| || ||| | ||||| || || ||||||||||| || ||||| ||| || Sbjct 904585 CAAGATGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTCTGGAAGTGGAGGC 904644 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | |||| || | | || | || ||||| || |||||||| | ||| | | Sbjct 904645 CTCAGACACCATTGAAAATGTCAAAGCTAAAATCCAGGACAAAGAGGGAATTCCTCCAGA 904704 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || ||| | |||||||||||||| |||||| |||||||| | ||| | | || || Sbjct 904705 TCAGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGACTA 904764 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 ||||||||||||||| || ||||||||| | || || || | || |||||| Sbjct 904765 CAATATTCAGAAGGAGTCAACTCTTCATCTAGTCTTGCGCCTCCGTGGAGGA 904816 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| || | ||||| | || ||||| |||||||| ||||| || ||| | Sbjct 905728 AATGCAAATTTTCGTCAAAACTCTGACTGGCAAGACCATTACTCTGGAAGTAGAGGCCTC 905787 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || |||| |||||| || ||||| || | ||| | |||| Sbjct 905788 CGACACCATTGAAAATGTTAAAGCCAAAATTCAGGACAAAGAAGGAATTCCTCCAGACCA 905847 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||| | |||||||||||||| |||||| ||||||| || | | || ||||| Sbjct 905848 GCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGACGGGCGTACCCTTTCTGACTACAA 905907 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 ||||||||||| || ||||||||| | || | ||| | ||||| ||| Sbjct 905908 CATTCAGAAGGAGTCAACTCTTCATCTCGTTCTCCGTCTTCGAGGTGGA 905956 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| | || || || || || || ||||| ||| |||| ||||| | Sbjct 905044 AATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCTTGGAGGTTGAAGCTTC 905103 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| || | | || | ||| ||||| || ||||||||| | ||| | |||| Sbjct 905104 AGACACAATTGAAAATGTCAAGGCCAAAATCCAGGACAAAGAGGGTATCCCTCCAGACCA 905163 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||| | || || ||||||||||| || || ||||| || |||| | | |||||||| Sbjct 905164 GCAGCGTCTGATTTTTGCTGGCAAGCAGCTTGAAGACGGAAGAACTCTTTCTGATTACAA 905223 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||| ||||| || || ||| | || | || | || ||||| Sbjct 905224 CATCCAGAAAGAATCAACGCTCCATCTTGTTCTCCGACTTCGTGGAGG 905271 >seq3620 Length=288302 Score = 93.3 bits (102), Expect = 3e-14 Identities = 166/241 (69%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || || || ||||||||||| || | ||| || ||| | Sbjct 91632 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAAACCATCACACTTGAAGTCGAGGCCTCT 91691 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | || | ||| ||||| || |||||||| | ||| | |||| Sbjct 91692 GATACGATCGAAAATGTCAAGGCTAAAATCCAGGACAAAGAGGGAATCCCTCCAGACCAG 91751 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | | |||||||| || |||||| | |||||| || | |||| |||||| Sbjct 91752 CAGCGTTTAATCTTTGCCGGAAAACAATTGGAAGATGGTCGTACGCTCTCCGACTACAAT 91811 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAATAATAA 22073 ||||| || |||||||| || || |||| |||||| | | || ||| |||||| |||| Sbjct 91812 ATTCAAAAAGAATCTACACTCCACTTGGTCTTACGTCTTAGGGGTGGAAATTAAT-ATAA 91870 Query 22074 A 22074 | Sbjct 91871 A 91871 Score = 89.7 bits (98), Expect = 4e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||| ||||| | ||||| |||||||| || || |||||| | ||| || |||| | Sbjct 89467 ACCAGCAGAGGTTGATCTTCGCTGGCAAGCAGCTCGAAGATGGACGTACTCTGTCCGACT 89526 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||||| || |||||||| ||||| |||| || ||||| ||||||| Sbjct 89527 ACAATATTCAAAAAGAATCTACACTTCACTTGGTCTTGCGTTTGAGAGGAGG 89578 Score = 86.0 bits (94), Expect = 4e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||| ||||| | ||||| |||||||| || || |||||| | ||| || |||| | Sbjct 89239 ACCAGCAGAGGTTGATCTTCGCTGGCAAGCAGCTCGAAGATGGACGTACTCTGTCCGACT 89298 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||||| || |||||||| ||||| |||| || ||||| |||| || Sbjct 89299 ACAATATTCAAAAAGAATCTACACTTCACTTGGTCTTGCGTTTGAGAGGTGG 89350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358103360858848