Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq1805 107 5e-20 seq3508 78.8 2e-11 >seq1805 Length=693400 Score = 107 bits (118), Expect = 5e-20 Identities = 343/529 (65%), Gaps = 11/529 (2%) Strand=Plus/Minus Query 2956 GAAATCAAGTATTATGGCTATTACCAATGGGTTTTCATCGTATTGTTCATCCAAGCGGTG 3015 || |||||||| | || ||||| ||||| | | || | ||| |||| || | Sbjct 423130 GACATCAAGTACCACAAGTACTACCAGTGGGTGTGCTTCACCCTTTTCTTCCAGGCCATT 423071 Query 3016 TTCTTCTCCATTCCGCAGTACATCTGGAAGGTATGTGAAGGAGGGAAAATGAAGACATTG 3075 | |||| |||||| | ||| | |||||| || ||||| || | ||| |||| || Sbjct 423070 CTTTTCTACATTCCACGCTACCTGTGGAAGACCTGGGAAGGTGGCAGAATCAAGATGCTG 423011 Query 3076 GCTCATGATCTGACTTCACCGTTCCTGAGCAAAGAGTGCATCACAGA--GAAGGTGGATC 3133 | | || || | || || | | ||| | || |||| || || | ||| | | Sbjct 423010 GTACTCGACCTCAATTGCCCAGTAGTCAGCGAGGACTGCAAGACTGACCGCAGGAAGCTG 422951 Query 3134 ATTTGATGGATTATTTTTTCATGCAGCTGCACGCGCAAAACTCTTACGCCTACAAATACT 3193 | | |||| || ||| | | |||||| ||||||||| ||||| | | | || Sbjct 422950 CT--GGTGGACTACTTTGCTACCAATCTGCACTCGCAAAACTTCTACGCGTTCCGCTTCT 422893 Query 3194 TTGGCTGCGAGCTGCTAAACTTTGTCAACGTTGTCGCACAGATATGCTTCATGAATGCCT 3253 | |||||| |||| ||||| ||||||| |||| ||||||| ||||||| || || Sbjct 422892 TCCTGTGCGAGGTGCTCAACTTCATCAACGTCGTCGGCCAGATATACTTCATGGATTTCT 422833 Query 3254 TTATAGGCGAAGACTTTTTGTTGTACGGAATCTATGTTACCTTCTTCAACCAG--GAAGC 3311 | | | || || || | ||||| | || | |||| | | | ||| Sbjct 422832 TCCTGGACGGCGAGTTCACGACCTACGGCTCGGACGTGGTCAAGTTCACCGAAATGGAGC 422773 Query 3312 CGCCCATCCGAACATGACGAACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTAC 3371 || ||| | |||| ||| ||| |||||||| | | | || || || Sbjct 422772 CGGAGGAGCGAGT-----GGACCCGATGTCGCGGGTCTTTCCGAAAGTGACCAAGTGCAC 422718 Query 3372 TTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCC 3431 || |||||||| ||| | || ||| | || | || | ||| || |||||| | ||||| Sbjct 422717 CTTCCACAAATATGGTGCGTCCGGCACGGTGCAGAAGTTCGACGGTCTCTGCGTGCTCCC 422658 Query 3432 GGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 | |||| | |||||||||||||||||| | |||||||||||||||||| Sbjct 422657 GCTGAACATCGTCAACGAGAAGATCTACGTGTTCCTCTGGTTCTGGTTC 422609 >seq3508 Length=816045 Score = 78.8 bits (86), Expect = 2e-11 Identities = 96/131 (73%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 ||||| || || |||| ||| | || || | | | || |||| | ||||||||| Sbjct 459400 TGTACCTTCCATAAATTTGGTGCCTCCGGAACGATTCAGAAGCACGACGCCCTCTGCATC 459459 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTG 3486 || | |||| | | ||||||||||||||||| |||||||||||||||||| ||| Sbjct 459460 CTGGCTCTGAACATCCTTAACGAGAAGATCTACATCTTCCTCTGGTTCTGGTTCATCGTA 459519 Query 3487 CTAGCCATCAT 3497 || ||| |||| Sbjct 459520 CTGGCCGTCAT 459530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479329512000