Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq2937 98.7 8e-16 seq458 96.9 3e-15 seq2352 87.8 1e-12 >seq2937 Length=2708049 Score = 98.7 bits (108), Expect = 8e-16 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCCAACAGG 108534 ||||||||| || ||||||| | | || || |||||||||| ||| |||||||| | Sbjct 538023 GATCACAGGACCCATCACAAGTTCACGGAGACCGCGGCCGACCCGCACGACGCCAACCGC 537964 Query 108535 GGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGA 108571 || |||| |||||||||||||||||||||||||||| Sbjct 537963 GGCTTCTTCTTCTCGCACGTGGGATGGCTCATGATGA 537927 Score = 95.1 bits (104), Expect = 9e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||| Sbjct 1465891 TGGCCCTCGGCGAAGGATGGCACAACTACCACCACGTCTTCCCCTGGGACTACAAGACCG 1465950 Query 108941 CCGAGTTGGGGAACGAC 108957 ||||| | || ||| || Sbjct 1465951 CCGAGCTCGGCAACTAC 1465967 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 108448 CAGAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC- 108506 ||||||||| || | ||||| | || ||| | || |||||||||| || || || Sbjct 1460518 CAGAACACCCTCTACGACTGGGTCCGGGACCACCGAGTCCACCACAAGTTTTCCGAGACC 1460577 Query 108507 GACGGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCAT 108566 |||| |||| || |||||| ||| | || |||| ||| | |||||||| |||||||| Sbjct 1460578 GACG-CCGATCCGCACAACAGCAATCGCGGCTTCTTCTTCGCCCACGTGGGCTGGCTCAT 1460636 Query 108567 GATGACCAAGGACCCCGACGTGATCTCGGCCGGTCGAAAAATGGACATGACGGACATATA 108626 |||| ||| | || || || ||| | ||||| | | ||||||| ||| || Sbjct 1460637 GATGCGCAAACATCCTGAAGTTATCAGGAAAGGTCGGGAGGTCGACATGAGCGACGTACT 1460696 Query 108627 CTCCGATCCGGTGGT 108641 | ||||||| || || Sbjct 1460697 CGCCGATCCCGTCGT 1460711 >seq458 Length=2674032 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 108464 AGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACA 108523 |||||||| |||||| |||| |||||||||| | | |||||| |||||||| |||| Sbjct 40674 AGTGGGTGAGGGATCACCGGGTGCACCACAAGTTCACGGACACGGATGCCGACCCGCACA 40615 Query 108524 ACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCG 108583 ||||||| || || |||| ||||| ||| |||| ||||| | | |||| | |||| Sbjct 40614 ACGCCAAGAGAGGTTTCTTCTTCTCTCACATGGGCTGGCTGCTCGTCCGCAAGCATCCCG 40555 Query 108584 ACGTGATC 108591 |||| ||| Sbjct 40554 ACGTCATC 40547 Score = 89.7 bits (98), Expect = 4e-13 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 108889 GGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTG 108948 |||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct 40061 GGCGAGGGCTGGCACAACTACCACCACGTCTTCCCCTGGGACTACAAGGCGGCCGAGTTG 40002 Query 108949 GG 108950 || Sbjct 40001 GG 40000 >seq2352 Length=3906906 Score = 87.8 bits (96), Expect = 1e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 118179 CCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTG 118238 || |||||||| || || || | || || || || || || | || |||||||| | Sbjct 1699485 CCATCGCGACCAGCTCTGCCGCTTTCCTGGTAGTAGCCCTCGATCGACTTGGGCATTGTT 1699426 Query 118239 TGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCGAA 118298 ||| || || | ||||||| ||||| ||||||||||||||||| |||||||||| | Sbjct 1699425 GCATGGATTACGTAGCGCACGTTTGGTTTGTCGATGCCCATCCCGAAAGCTATCGTCGCA 1699366 Query 118299 CATATCAC 118306 || ||||| Sbjct 1699365 CAGATCAC 1699358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381749945171328