Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2005 147 2e-30 seq3620 100 3e-16 >seq2005 Length=1592806 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||| | ||| | ||| | |||||||||| |||||||||||||| Sbjct 905955 CCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAA 905896 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||| || | ||||||||| | | |||| |||||||| ||||| ||||| Sbjct 905895 AGGGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGAGGA 905836 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| |||| | ||||| | ||| | |||||||| | ||| || Sbjct 905835 ATTCCTTCTTTGTCC-TGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCTAC 905777 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || |||||||||||||| || ||||| ||||| Sbjct 905776 TTCCAGAGTAATGGTCTTGCCAGTCAGAGTTTTGACGAAAATTTGCAT 905729 Score = 116 bits (128), Expect = 4e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| | ||| | ||| | ||| | |||| || ||||| |||||||| || Sbjct 905500 GCCTCCTCGAAGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCAGA 905441 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || | || || ||||| || || | | || ||||||||||| || || || Sbjct 905440 CAGGGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGTGG 905381 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| |||||| ||| | | ||| | ||| || | | || || Sbjct 905380 GATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTATCTGATGCTTCAAC 905321 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||| | || | ||||||||||||||||||||||||||||| |||||| || Sbjct 905320 CTCCAGAGTGATGGTTTTACCAGTCAGAGTTTTTACAAAAATTTGCATGCCT 905269 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || ||||||| | | ||||||||||| ||||||||||| Sbjct 906411 CCTCCGCGAAGACGCAAGACCAAATGTAAGGTGGACTCCTTTTGGATGTTGTAGTCTGAA 906352 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||||| || |||||||||| | |||| |||||||| ||||| || || Sbjct 906351 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906292 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| || || ||| |||| | ||| | | ||| | ||||||| | || || Sbjct 906291 ATGCCTTCCTTATCC-TGAATTTTAGCTTTGACGTTTTCGATAGTGTCGGAAGCTTCAAC 906233 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||||| || | ||||| || ||||||||||| Sbjct 906232 TTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906185 Score = 104 bits (114), Expect = 2e-17 Identities = 166/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||| | ||| | ||| | |||| || ||||| |||||||| || | Sbjct 905727 CCACCTCGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGATGTTGTAATCAGAC 905668 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | || | || || ||||||||||| | | | || ||||| |||||||| ||||| Sbjct 905667 AGGGTTCTGCCA-TCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAGGAGG 905609 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||||||||| ||| | || | ||| | | ||| | || || | | ||| | Sbjct 905608 GATGCCTTCTTTGTC-TTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGCCTCTA 905550 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 | || | || | || || ||||||| |||||| |||||||| |||||| || Sbjct 905549 CTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCATGCCT 905497 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||||| || || || | | ||||| |||||||| ||||| || Sbjct 905043 CCTCCTCTTAGACGCAGGACCAAGTGAAGAGTAGACTCTTTTTGAATATTGTAATCAGAA 904984 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || || ||||| || | | |||| |||||||||||||| ||||| Sbjct 904983 AGAGTACGTCCATCTTCCAGCTGTTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGGA 904924 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| ||| || ||| | | ||| | ||||| | | || ||| Sbjct 904923 ATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATTGTGTCTGAAGCTTCAACC 904864 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||||| ||||| ||||| || ||||| Sbjct 904863 TCCAGGGTAATGGTCTTTCCAGTCAATGTTTTAACAAAGATTTGCAT 904817 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||| | || | ||| | | ||||| ||||||||||||||||| Sbjct 906183 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906124 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||||| || |||||||||| | |||| |||||||| ||||| || || Sbjct 906123 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906064 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| || || ||| |||| | ||| | | ||| | ||||||| | || || Sbjct 906063 ATGCCTTCCTTATC-CTGAATTTTAGCTTTGACGTTTTCGATAGTGTCGGAAGCTTCAAC 906005 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||||| || | ||||| || ||||| ||||| Sbjct 906004 TTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 905957 >seq3620 Length=288302 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||||||| || || || | | || || |||||||| ||||||||| | Sbjct 89350 CCACCTCTCAAACGCAAGACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAC 89291 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || ||||| || || || | |||| | | ||| ||||| || || Sbjct 89290 AGAGTACGTCCATCTTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 89231 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| || || | | || | ||||||| | ||| ||| Sbjct 89230 ATGCCTTCCTTATCTTGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCAACC 89171 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| || | || || |||||||| ||||| || |||||||||||| Sbjct 89170 TCGAGGGTGATGGTCTTCCCAGTCAGGGTTTTCACGAAAATCTGCATG 89123 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||||| || | | ||||| || || ||||| || || | Sbjct 90262 CCACCACGAAGACGAAGTACTAAGTGAAGAGTAGACTCTTTCTGTATGTTATAATCAGAC 90203 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| || || || |||| | || | |||||| |||||||| || Sbjct 90202 AGAGTGCGTCCATCCTCAAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCCGGGGGA 90143 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| ||| || |||| | || | |||||||| || || || Sbjct 90142 ATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCGGACGCTTCAACT 90083 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || |||||||||||||| ||||| || || ||||| Sbjct 90082 TCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTGCAT 90036 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || ||||| | | ||||| || ||||||||||| ||| || |||||| || Sbjct 90476 CAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGTCCATC 90417 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 |||||||| || || | |||||| |||||| || || ||||| |||||||| || || Sbjct 90416 TTCGAGTTGCTTTCCAGCGAAGATTAAACGCTGCTGATCTGGAGGAATACCTTCCTTATC 90357 Query 138522 GGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 |||||| || | | || | ||||||| | ||| ||||| | || | || Sbjct 90356 TTGGATTTTGGCCTTGACATTCTCGATCGTGTCGGATGCCTCAACCTCAAGGGTGATGGT 90297 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || |||| || || || || |||||||| Sbjct 90296 CTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496231929488640