Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq4696 114 2e-20 seq4429 84.2 3e-11 >seq4696 Length=9412112 Score = 114 bits (126), Expect = 2e-20 Identities = 287/420 (68%), Gaps = 16/420 (4%) Strand=Plus/Plus Query 203916 GCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG--GGGTCGGCCATGTGAAT 203973 |||| ||||| | |||||| || | || || || ||||| || | || ||||| | Sbjct 480612 GCCAGCCGTAGAAGTGCATCGATGTGAGCTTT-TC-CGTTGTTGGCTGAGCTATGTGTAC 480669 Query 203974 GTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGG 204032 || |||||||| || || ||||| ||| || ||||| || ||||| || | ||||| Sbjct 480670 ATTTAGAGACTGAGACTGATCAATGAA-GGCACCTCGATCCGCAGCCATTTTCAAAATGG 480728 Query 204033 TCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGA--GGCACATC 204090 |||| |||||||||||||| || || ||| ||| || ||| | || | | | | Sbjct 480729 TCTTTTGCGAAATCTCCCAGACTGTTTTGTACA-GTTTCT--TCAATTCATCCGGAATCC 480785 Query 204091 TTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCA-TCCTCGTCTCCTCCCCC 204148 || | | || ||| | ||| ||||||| || || | | ||| || || ||||||| || Sbjct 480786 TTGCAAGGTTCTGAACCGAACCGTTGTTTGCGATTA-TTTCATTCTTCATCTCCTCGTCC 480844 Query 204149 CACA-TGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCC 204207 |||| ||| ||| ||| || || || || || |||| || || || ||||| Sbjct 480845 CACAGATCCCTGTCTG-TCAAATCTTTCAACAAATGAGGATTGACGACTTGGAATTCTCC 480903 Query 204208 GGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCC 204267 || || || | | |||| | | |||| | ||| | || || | || ||||||||||| Sbjct 480904 AGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTGTTGCC 480963 Query 204268 GAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACC 204327 ||||| || ||||| || || ||||| || || || | || || ||||| || || Sbjct 480964 CAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGAACGCC 481023 >seq4429 Length=4547816 Score = 84.2 bits (92), Expect = 3e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 160214 GAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCC 160273 ||||||||||| | ||| | ||||| ||||||| ||| ||| ||||| | ||| Sbjct 2612761 GAGTACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAGCCATAGAAGCAACGAGCC 2612702 Query 160274 TCCAGATA-CTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTC 160332 | ||| | |||||| ||||| |||| | | | ||||||| |||| || | || || Sbjct 2612701 T-CAGTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTCTCATTGACAATACCATC 2612643 Query 160333 GGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTC 160377 | ||| || ||||| ||||| || || |||||||| || ||||| Sbjct 2612642 TGAGGCAGCGAAGAATGCCAAAACATGCGAGATGAAGTGCCTCTC 2612598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795106377470720