Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq3620 98.7 7e-16 seq2005 93.3 3e-14 >seq3620 Length=288302 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||| ||||| || || | ||| ||||| ||||| |||||||| | | Sbjct 90262 CCACCACGAAGACGAAGTACTAAGTGAAGAGTAGACTCTTTCTGTATGTTATAATCAGAC 90203 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | |||| |||| || | || || ||| | ||||| ||||||||||| |||| ||| Sbjct 90202 AGAGTGCGTCCATCCTCAAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCCGGGGGA 90143 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTG-CGCTTTCCAC 39671 | ||||| ||||| || || || | || | | ||||| | ||| ||| || Sbjct 90142 ATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCGGACGC-TTCAAC 90084 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | ||||| || ||||| || | ||| ||||||||||| ||||| Sbjct 90083 TTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTGCAT 90036 >seq2005 Length=1592806 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| ||||| | ||| || || | ||| | ||| ||||||||| || || ||||| | Sbjct 905500 GCCTCCTCGAAGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCAGA 905441 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 || | | |||| |||| ||| || || | ||||| | |||||| ||||| | || Sbjct 905440 CAGGGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGTGG 905381 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671 | ||||||||||| ||||| ||||| | | | || |||| ||| || Sbjct 905380 GATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTATCTGATGCTTCAAC 905321 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 |||| ||| || |||||||| || | ||||||||| || || |||||| Sbjct 905320 CTCCAGAGTGATGGTTTTACCAGTCAGAGTTTTTACAAAAATTTGCATG 905272 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| | |||||| ||||| || | ||| |||||||| ||||| ||||| | Sbjct 905043 CCTCCTCTTAGACGCAGGACCAAGTGAAGAGTAGACTCTTTTTGAATATTGTAATCAGAA 904984 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | ||| |||| |||| ||||| || |||| || | |||||| || || | || Sbjct 904983 AGAGTACGTCCATCTTCCAGCTGTTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGGA 904924 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||||||||| || || ||| | | | | |||||||| ||| || Sbjct 904923 ATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATTGTGTCTGAAGCTTCAACC 904864 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||| ||||| || || || || || ||||| || ||||| ||||| Sbjct 904863 TCCAGGGTAATGGTCTTTCCAGTCAATGTTTTAACAAAGATTTGCAT 904817 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 39559 CGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCT 39618 ||| |||| || |||||||| || |||| || | |||||||||||| | || | || Sbjct 904749 CGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATTCCC 904690 Query 39619 TCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAA 39678 |||||||| ||||| ||| | | | | ||||||| | ||||| |||| | Sbjct 904689 TCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCCACTTCCAGA 904630 Query 39679 GTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || ||||| || || || ||||| || ||||||||||| Sbjct 904629 GTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCAT 904589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347348804718896