Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3545 98.7 8e-15 seq4046 87.8 1e-11 >seq3545 Length=1895843 Score = 98.7 bits (108), Expect = 8e-15 Identities = 125/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 870796 AATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAG 870855 |||| | || |||| ||| ||| ||| |||| || ||||||||| |||| ||||| || Sbjct 898385 AATTCTGGTGGATTTTTCCAGTCCTAATGTTGCAAAGGAAATGCATGTTGGTCATTTGAG 898326 Query 870856 ATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTA 870915 || || |||||||| || |||| | |||| ||| | | || || |||||| Sbjct 898325 GTCTACCATTATTGGAGACAGTATTGCACGTTTATTGGAATTCTTAGGTCATGATGTTCT 898266 Query 870916 TCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCT 870967 | | || ||||| | || ||||||||||| ||||| || ||| |||||||| Sbjct 898265 TAGGATCAATCACATTGGAGATTGGGGAACACAATTTGGAATGCTAATTGCT 898214 >seq4046 Length=3673754 Score = 87.8 bits (96), Expect = 1e-11 Identities = 229/349 (66%), Gaps = 3/349 (1%) Strand=Plus/Plus Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 ||||| || ||||||||||| | ||| | || || || || | ||| | ||| Sbjct 440338 TCAAAGTCCTCACCTCCCAAGTGAGTGTCACCGTTGGTGGCAACGACCTCGAAGACTCCG 440397 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 | || | | || ||| | |||||| ||| |||||||||| || || | || || Sbjct 440398 TTGTCGATGGTCAGCAGACTGACATCAAAGGTACCACCACCCAAGTCGAAGACGAGAACG 440457 Query 518147 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 518206 ||| | ||| ||| || || |||||||| || || | || || || || || || Sbjct 440458 TTCTTCTCTCCGTC---CTTCTTGTCAAGACCGTAAGCGATGGCGGCGGCGGTGGGCTCG 440514 Query 518207 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 518266 || || || |||| || | ||||| | || |||| ||||| || |||||||| | Sbjct 440515 TTTATGATCCTCATTACCTGGAGACCGGAGATGATTCCGGCATCCTTGGTGGCTTGCCGC 440574 Query 518267 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATA 518326 || | ||||| || || ||||| || || | ||||| | || || | ||||| | Sbjct 440575 TGAGCGTCGTTGAAGTAGGCAGGGACGGTGACGACGGCGTGGGTGACCTTCTTACCGAGG 440634 Query 518327 TAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 518375 ||||| || |||| ||||| || | | || ||| | || |||| Sbjct 440635 TAAGCCTCCGCGGTTTCCTTCATCTTTCCAAGAACCATAGCAGAGATTT 440683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780578650379872