Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq4696 168 8e-37 seq1332 122 1e-22 seq4429 84.2 2e-11 >seq4696 Length=9412112 Score = 168 bits (186), Expect = 8e-37 Identities = 318/465 (68%), Gaps = 2/465 (0%) Strand=Plus/Plus Query 48117 TATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACAC 48176 ||||| || |||||||| || || | |||| | ||| ||||||||||||| |||||| Sbjct 481919 TATAATTTATCAAATTCTTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACAC 481978 Query 48177 ATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGA 48236 || || ||| | || | ||||| |||| || | || || ||||| | | Sbjct 481979 ATTAAACTCCATTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAA 482038 Query 48237 GCTATAAATAAA-TCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAG 48295 || ||| | || || || | ||| |||||| || || | ||| |||| || || || Sbjct 482039 GC-ATAGAAAAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAG 482097 Query 48296 AAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTT 48355 ||| || | || ||||||||||| ||||| ||||| || || | | || |||| || Sbjct 482098 AAATTCGAAGATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTT 482157 Query 48356 ATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAAT 48415 || || |||||||| | || | ||||| || || || ||||| | ||| || || | Sbjct 482158 GTTTCCACCTTGATCAACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAA 482217 Query 48416 ACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT 48475 |||||| |||| || || || || ||||| | | ||| | ||||||||| | || Sbjct 482218 ACCATTAGATACGCCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAAC 482277 Query 48476 TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATA 48535 | ||| || ||||| || ||| | || |||||| | || || |||||||| Sbjct 482278 ACTCAAACCAATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATA 482337 Query 48536 AATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACT 48580 ||||||||| ||||| || || |||| | | || |||||||| Sbjct 482338 AATTCCTTCAATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 482382 Score = 132 bits (146), Expect = 5e-26 Identities = 240/348 (69%), Gaps = 5/348 (1%) Strand=Plus/Plus Query 47100 ATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCT 47159 || || | ||| ||||| ||| ||||||||| || ||||||| ||| || ||||| | Sbjct 480662 ATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATTTTC 480721 Query 47160 AAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAA-TTTGTTTAATGTCTTCTGG 47218 ||||| | |||| | |||||||| |||||||| || | ||| || ||| || || || Sbjct 480722 AAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAAT-TCATCCGG 480780 Query 47219 GAGATTAGTA---TTTTGAATAGATCCTCCgttttctataattttgttttttaattcatt 47275 | | | | || |||| || || |||| | || |||| || || | || | Sbjct 480781 AATCCTTGCAAGGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCCTC 480840 Query 47276 tgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTGAAATTC 47335 ||| || | | || || || ||| || | ||||||||| || | ||| ||||| Sbjct 480841 GTCCCACAGATCCCTGTCTGTCAAATCTTTCAACAAATGAGGATTGACGACTTGGAATTC 480900 Query 47336 TCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTCATTATT 47395 |||||| || || | | | | || || || ||||| || || ||||| ||||| || || Sbjct 480901 TCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTGTT 480960 Query 47396 TCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAA 47443 || |||||||| || || || ||||| ||||| | |||| ||| || Sbjct 480961 GCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAA 481008 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 47865 ACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTA 47924 |||||| |||||| || |||||||||| ||| || || ||||| || | |||| || | Sbjct 481590 ACAAACATATTAACGGCAATAGATGCTAAATTGCACACGGCTACTTCGTCTGGAGAAGAA 481649 Query 47925 TATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT- 47983 || || | | ||| | |||| ||||| | | |||||||||| | ||||| ||||| Sbjct 481650 TACTGCACAACTTCCGTGCATAAATTACTGCTTCTGATAGTACCAAGGTTTTGTTGATTG 481709 Query 47984 -ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAG 48042 ||| | |||| || ||||| | ||| |||| ||||||||||| | |||| Sbjct 481710 GATTTGCGAT--TACAGTGATCTTTGTATAACATGTAAGGGGTTCCAGTTTCAACTTGAG 481767 Query 48043 A 48043 | Sbjct 481768 A 481768 >seq1332 Length=421543 Score = 122 bits (134), Expect = 1e-22 Identities = 131/173 (76%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 47864 AACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGT 47923 ||||||| |||||| || || ||||||| ||||||||| ||||| ||||||||| || Sbjct 276468 AACAAACATATTAACAGCAATGGATGCTAAATTACATACTGCTACTTCATTTGGAGAAGA 276409 Query 47924 ATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT 47983 |||||||| ||||||| |||| ||||| | ||| ||||| || | |||||| ||||| Sbjct 276408 GTATTGTATAATTTCAGTGCATAAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATT 276349 Query 47984 --ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTC 48034 ||| | | || | || || || |||||| |||| ||||||||||| Sbjct 276348 TGATTTAAGAT--TGCAGGGATCTTTATAGAGCATATAAGGAGTTCCAGTTTC 276298 Score = 114 bits (126), Expect = 1e-20 Identities = 218/320 (68%), Gaps = 1/320 (0%) Strand=Plus/Minus Query 48270 TTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAA 48329 || ||| |||| |||| | ||||| || || | ||||| |||||||| || |||| | Sbjct 275906 TTACCAATATTTTTTTTTAAATCAAGGAATTCAAAAATATCTGCATGCCAGGGCTCTAGA 275847 Query 48330 TATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTG 48389 || | || | | |||| || | ||| || || |||||| | | | | | || |||||| Sbjct 275846 TAAAGAGCAAATGCACCAGGCCTTTTGTTTCCACCTTGA-CAACAAAGCGTGCTGTATTG 275788 Query 48390 TTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAA 48449 || | ||||| | ||| || || | ||||||| | || || | | | ||| | Sbjct 275787 TTGAATACTCTGATCATAGGTACTAATCCATTTGCAAATCCGTTATTACTAGCAATCGCA 275728 Query 48450 CTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATT 48509 |||| ||||||| |||||| || ||||| ||||||||||| ||| || Sbjct 275727 GTTCCTTTAGCTCTAATATTATGAACACTTATACCAATACCACCTGCGGATTTGCTAATA 275668 Query 48510 AGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAAT 48569 | ||||| | || | || || ||||||||||||||||||| || ||||| | | Sbjct 275667 ATTGCACATCTCTTTAATGTTTCGAAAATTCCTTCTATACTATCTTCAATCATGGTAAGA 275608 Query 48570 AGAAAACAACTAGACATTTG 48589 | |||||| ||| |||| || Sbjct 275607 ATAAAACAGCTAAACATGTG 275588 Score = 107 bits (118), Expect = 2e-18 Identities = 166/236 (70%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 47232 TGAATAGATCCTCCgttttctataattttgttttttaattcatttgaccaaagttttcgt 47291 |||||||| || ||| | || |||| |||||| | ||||| |||||| |||| Sbjct 277273 TGAATAGAACCATTGTTGGCAATTATTTCGTTTTTCATTTCATCATCCCAAAGATTTCTC 277214 Query 47292 tcagttaatgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTA 47351 | ||||| ||||| | ||| ||||||||||| |||||||| || | || | Sbjct 277213 TTTGTTAAATCATTTAATAAATGTGGATTAACAATCATGAATTCTCCTGACAAAAC---A 277157 Query 47352 CGGCTA---TATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGA 47408 || ||| || ||||||||||| || || || | |||||||| ||||| || || ||| Sbjct 277156 CGTCTAGTGTAAATATTACTTGTGTAAGGCTCCACTGATTCATTGTTTCCCAATATCTGA 277097 Query 47409 GCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTT 47464 || || || ||||| ||||| | ||||| | || ||| | |||||||| || Sbjct 277096 GCTGTAGAAGCTGTCGGCATTGGTGCAAGAAGTAGTGAATTACGAACTCCATACTT 277041 Score = 91.5 bits (100), Expect = 2e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109 |||| ||||| |||||||| ||| | ||| | |||||| | ||||||| || Sbjct 277534 TCCAGCCATAAAAATGCATGGAAGTAAGTTTTTCAGTTGTAGGTTTAGCCATATGAACAT 277475 Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169 | | |||||| || ||||| || || |||| ||| || |||| | |||||||| Sbjct 277474 TTACAGATTGTGATTGGTCAATGAAAGCGCCTCGATCTGCAGCCACTTTTAAAATAATTT 277415 Query 47170 TTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTT 47214 | || ||||||||||||||||||||||| | || ||| | |||| Sbjct 277414 TCTGAGGTATCTCCCATACTGTTTTATATAATTCTTTCAAATCTT 277370 >seq4429 Length=4547816 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 19459 TCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCA 19518 ||||||||||| ||||||||||| ||||| || |||||||| ||||||| ||| || || Sbjct 2612468 TCTACTTCTTCCACTGTCCAAAACGAAGCTTCGGCTTTTTTGTACATGTGCCAAATGTCG 2612409 Query 19519 CGATATTGTATAGGAAATATAACAAATCT 19547 | |||| || ||||| | |||||||| Sbjct 2612408 GGCCATTGGATTGGAAACAATACAAATCT 2612380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562074286519680