Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3620 131 1e-24 seq2005 131 1e-24 seq3545 111 1e-18 seq1091 98.7 8e-15 seq948 96.9 3e-14 >seq3620 Length=288302 Score = 131 bits (144), Expect = 1e-24 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 || || |||||||| ||||| || ||| || ||| ||||| |||| | || | | Sbjct 89797 AGTCGAAGTACAAGGTGAAGTGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGCGT 89738 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| ||||| || || |||||||| || || |||||||| || ||||| |||||| Sbjct 89737 CCATCTTCGAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGGGGAATACCTTCT 89678 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 || |||||||| || || || |||||| ||||||| | | | ||| ||||| Sbjct 89677 TTGTCTTGAATCTTAGCCTTGACATTCTCAATCGTATCAGAA-GCTTCGACTTCCAGAGT 89619 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || ||||| |||||||| || ||||| ||||||||||| Sbjct 89618 AATTGTTTTGCCAGTAAGCGTCTTAACAAAAATTTGCAT 89580 >seq2005 Length=1592806 Score = 131 bits (144), Expect = 1e-24 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || |||||||| || || |||||| || |||||||||| || |||||| Sbjct 905490 AGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCAGACAGGGTTCTT 905431 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| ||||| ||||| || ||||| || | || ||||| || || || |||||| Sbjct 905430 CCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGTGGGATACCTTCT 905371 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAGAGT 563435 || ||||| ||||| ||| || ||||| ||||| | || | | || ||||| Sbjct 905370 TTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTATCTGA-TGCTTCAACCTCCAGAGT 905312 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||||||||| |||||||| || ||||||||||| Sbjct 905311 GATGGTTTTACCAGTCAGAGTTTTTACAAAAATTTGCAT 905273 Score = 127 bits (140), Expect = 2e-23 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || |||||||| || || |||||| || |||||||||| || ||||| Sbjct 905718 AGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGATGTTGTAATCAGACAGGGTTCTG 905659 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| |||||||| || ||||| || || | ||| || |||||||| || |||||| Sbjct 905658 CCATCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAGGAGGGATGCCTTCT 905599 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGT-GTGAGTACATTCGAGAGT 563435 || |||||||| || ||| || || || ||||||| | ||| ||| | ||| Sbjct 905598 TTGTCTTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGCCTCTAC-TTCCAAAGT 905540 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || ||||| | |||||| || ||||||||||| Sbjct 905539 AATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCAT 905501 Score = 122 bits (134), Expect = 7e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| || |||||||| || || || ||| ||||| |||| || || | Sbjct 905946 AGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGC 905887 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| | |||||| || ||||| ||||| | ||||| || ||||||||||||||| Sbjct 905886 CCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGAGGAATTCCTTCT 905827 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 || || |||||||| ||| || ||||| || || | | ||| ||| ||||| Sbjct 905826 TTGTCCTGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCTAC-TTCCAGAGT 905768 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || ||||| |||||||| |||||||||||||| Sbjct 905767 AATGGTCTTGCCAGTCAGAGTTTTGACGAAAATTTGCAT 905729 Score = 118 bits (130), Expect = 9e-21 Identities = 161/223 (72%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || ||||| || || | ||||| ||| ||||| |||||||||||||| ||||| Sbjct 905037 CTTAGACGCAGGACCAAGTGAAGAGTAGACTCTTTTTGAATATTGTAATCAGAAAGAGTA 904978 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | |||||| || ||||| || ||||| ||||| | || || ||||||||||||||| Sbjct 904977 CGTCCATCTTCCAGCTGTTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGGAATTCCT 904918 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGA 563431 ||||| ||||| || || ||| || |||||||| || || | || || | Sbjct 904917 TCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATTGTGTC--TGAAGCTTCAACCTCCA 904860 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | |||| || || ||||| | |||||||| || |||||||| Sbjct 904859 GGGTAATGGTCTTTCCAGTCAATGTTTTAACAAAGATTTGCAT 904817 Score = 105 bits (116), Expect = 5e-17 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 || |||||||| || || || ||||||||| |||| ||||| | | |||||| Sbjct 904797 ACTAGATGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAAAGAGTACGTCCATCTTCT 904738 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 | |||||| || ||||| ||||| | |||||||| ||||||||||| ||||| || || Sbjct 904737 AATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATTCCCTCTTTGTCCTGG 904678 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTT 563444 ||||| ||| || ||||| || || | | | | || ||| ||||| | ||||| Sbjct 904677 ATTTTAGCTTTGACATTTTCAATGGTGTCTGAG-GCCTCCACTTCCAGAGTGATGGTTTT 904619 Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| | ||||| || || || ||||| Sbjct 904618 GCCAGTCAAGGTTTTCACAAAGATCTGCAT 904589 >seq3545 Length=1895843 Score = 111 bits (122), Expect = 1e-18 Identities = 124/163 (76%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 930666 GATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCATT 930725 |||||||| || ||| |||| || ||||||||| |||| |||||| | ||||||||| Sbjct 898375 GATTTTTCCAGTCCTAATGTTGCAAAGGAAATGCATGTTGGTCATTTGAGGTCTACCATT 898316 Query 930726 ATTGGAGAATCTTTATGTA-GATTATATGAATATTGTGGAAGTAAAGTTCATCGAGTCAA 930784 |||||||| | | || | | |||| |||| | || | | |||| | | |||| Sbjct 898315 ATTGGAGACAGTAT-TGCACGTTTATTGGAATTCTTAGGTCATGATGTTCTTAGGATCAA 898257 Query 930785 TCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCT 930827 ||| ||||| |||||||||||||||||||| ||| |||||||| Sbjct 898256 TCACATTGGAGATTGGGGAACACAATTTGGAATGCTAATTGCT 898214 >seq1091 Length=289952 Score = 98.7 bits (108), Expect = 8e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAG-AAGTTACGGATGC 550401 ||| | |||||||||||| |||| || | || | ||| || | |||| |||| Sbjct 188263 GTTCTTATGAAAATGAAAGAAACTGCTGAAGGTTAT-TTGAGCACGCCCGTTAAAAATGC 188205 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 || || || || ||||| || || || ||||| || | || || ||||| ||||| || Sbjct 188204 CGTTATCACCGTCCCAGCTTACTTCAACGACTCTCAGAGGCAGGCCACTAAGGATGCCGG 188145 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 || ||||||||| | || |||||| | | ||||| |||||||| || ||||| || || Sbjct 188144 ACAAATTGCTGGATTAAACGTTCTTAGAGTAATCAACGAACCTACAGCAGCTGCTCTCGC 188085 Query 550522 ATATGGACTTGATAAA 550537 |||||| | || ||| Sbjct 188084 CTATGGAATGGACAAA 188069 >seq948 Length=5643655 Score = 96.9 bits (106), Expect = 3e-14 Identities = 256/387 (66%), Gaps = 8/387 (2%) Strand=Plus/Plus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269 ||||| || ||||| || ||||| ||||| ||| | |||||||||||||| | || | Sbjct 20172 AATCCCGACGAGGCAGTCGCCTACGGTGCAGCAGTGCAAGCAGCTATTCTGACCGGCGAG 20231 Query 552270 ACTG--ATGA----AAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTT 552323 || | || || || ||| | || | || ||||| ||| | ||||| || || Sbjct 20232 GGTGGCAAGAACTCAACCCTCCAAGACGTTCTGCTGGTAGACGTTGCACCTCTGTCCCTC 20291 Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 || | || || | ||||| | ||||| || | ||||| | || | ||||| Sbjct 20292 GGCATCGAGACCGCCGGAGGAGTCATGACCAACATCATCGAGCGCAACGCCCGCATTCCA 20351 Query 552384 TGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 || ||| | || | || ||||||| || ||||| ||| | |||||||| || ||| Sbjct 20352 TGCAAACAGTCGCAGACCTTCACTACGTACTCGGATAACCAACCGGCTGTTACCATCCAA 20411 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGT-ACTTTTAATTT 552502 | || || || || | | || || || || || || |||||| ||| || | Sbjct 20412 GTGTTCGAGGGTGAGCGTGCCATGACCAAGGACAACAACCATCTTGGTCGCTTCGAACTC 20471 Query 552503 AGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGA 552562 || ||||| | || || || ||||| || || | || || || || ||||| || || Sbjct 20472 AG-CGGTATCGCACCGGCGCCCCGTGGCGTGCCAAAGATCGATGTCACCTTCGACATGGA 20530 Query 552563 TGCCAATGGAATTTTGAATGTGACTGC 552589 |||||| || || || | || ||||| Sbjct 20531 TGCCAACGGTATCCTGCACGTCACTGC 20557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029036231286880