Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq3545 141 8e-29 >seq3545 Length=1895843 Score = 141 bits (156), Expect = 8e-29 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 30166 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30225 ||||||||||||||||||||||| || || || || |||| ||| |||||||| || | Sbjct 1750026 GCTCCGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTATCG 1749967 Query 30226 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 30285 ||| || | |||||||| || | |||| ||||||| |||||| ||||| || Sbjct 1749966 GTGAACCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACGCCT 1749907 Query 30286 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 30345 || |||| |||||||| | ||| ||||| || | | |||||| |||| |||||| || Sbjct 1749906 TTGTCGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCGACC 1749847 Query 30346 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGaaa 30386 || || ||||| || ||||||| || || || ||||| Sbjct 1749846 ACAGCACGCCAAAGAACGTTCTTGGTTGTCAGCAGAGGAAA 1749806 Score = 131 bits (144), Expect = 1e-25 Identities = 171/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 |||||| ||||| || || || ||||||||||| || ||||| ||||| || || || Sbjct 330392 CATGTCGACGTACTTGGCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATC 330451 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 || || || | | || ||||| | |||| | || |||||||| |||||||||| Sbjct 330452 GCCTTCCTCGCGATCCTGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTC 330511 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 30329 |||||| || || || || |||| ||||| |||| ||| || || |||| || |||||| Sbjct 330512 CCAGATTTTCACGCCTTTGGCGGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCA 330571 Query 30330 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGaaa 30386 | || ||| || | || ||| ||| || || | ||| || ||||| || || || Sbjct 330572 GAACAACTCTTCTGCAACAGCCCGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 330628 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29881 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 29940 || || |||||| | ||||| | ||| || ||| ||||| || || || || || ||| Sbjct 1750383 TGGGCAATCATGCATGTGAGCAAAGAATAAGAGGCAATGTTGAATGGGACTCCAAGTCCC 1750324 Query 29941 ATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTC-GCTCACGTAAAACTG 29999 || || | || || || |||||||| || |||||||| || ||| || |||| || Sbjct 1750323 ATATCAGCACTTCTTTGATACAGCTGACAAGATAGCTCTCCATCAGCT-ACACAAAATTG 1750265 Query 30000 ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCA 30059 | || | || ||||||||||||||||| | | ||| || ||||||||||| Sbjct 1750264 AACCAGAGCATGACACGGAGGAAGAGCCATTAAAGGAATATCTACTGGATTCCAGGCGCA 1750205 Query 30060 CACGATGATGCGCCTGTCTTCTGGGTTGTT 30089 || || || || | ||| || || ||||| Sbjct 1750204 CATTATTATTCGTCGGTCGTCCGGTTTGTT 1750175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408593138107376