Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4429 104 4e-17 seq4696 91.5 3e-13 >seq4429 Length=4547816 Score = 104 bits (114), Expect = 4e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883 ||||||| |||||| |||| ||||||| | | ||||| ||||||| ||| || | Sbjct 2612924 GAAGGCGAACTGGGCCCTGAACTGGATCAGTCACGATAGCGCGACGTTTGCCGAACGAGT 2612983 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG 25943 | | ||||| ||||| || ||||| ||||||||||||||| || || ||||| ||||| Sbjct 2612984 GATTGCCTTCGCTGCAGTCGAGGGAATCTTTTTCAGCGGTAGTTTCGCTGCCATTTTCTG 2613043 Query 25944 GCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 ||| ||| || || ||||| || || ||| ||| || ||||| ||||| Sbjct 2613044 GCTGAAGAAGCGTGGTCTTATGCCTGGACTTACCTTCAGCAATGAACTCATTTCTAGGGA 2613103 Query 26004 CGAGG 26008 ||||| Sbjct 2613104 CGAGG 2613108 Score = 96.9 bits (106), Expect = 6e-15 Identities = 108/143 (76%), Gaps = 6/143 (4%) Strand=Plus/Plus Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || ||||||||||| || ||||| |||||||| || || ||||||||| ||| | ||| Sbjct 2612619 GTTTTGGCATTCTTCGCTGCCTCAGATGGTATTGTCAATGAGAATCTGGTTGAGCGTTTC 2612678 Query 25657 ACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 | | |||||||||| ||| ||||| || ||||| || |||||| ||||||| Sbjct 2612679 AGCCAGGAAGTGCAG---GTGACTGAGGCTCGTTGCTTCTATGGCTTCCAGGTGGCCATT 2612735 Query 25714 GAAAATGTGCACTCTGAGGTGTA 25736 ||||| | |||||||| |||| Sbjct 2612736 GAAAACATTCACTCTGAAATGTA 2612758 >seq4696 Length=9412112 Score = 91.5 bits (100), Expect = 3e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 |||||||| | |||||| | ||| || || |||| |||||| | |||||||||| Sbjct 481973 GGACACATTAAACTCCATTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATC 482032 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 || | || | || || ||||| | | | || || || |||| || | ||| Sbjct 482033 CATAAAGCATAGAAAAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGA 482092 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 || | ||| || || |||||||| |||||||| |||| ||| | ||| | || || ||| Sbjct 482093 TCGAGAAATTCGAAGATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGT 482152 Query 222179 CGCTTGTTGCCACCCTGATCCAC 222201 | |||||| ||||| ||||| || Sbjct 482153 CTCTTGTTTCCACCTTGATCAAC 482175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928787768929280