Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq2005 120 3e-22 seq3620 100 2e-16 >seq2005 Length=1592806 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| |||||||| || || || ||||||||| || ||| |||| Sbjct 904816 AATGCAAATCTTTGTTAAAACATTGACTGGAAAGACCATTACCCTGGAGGTTGAAGCTTC 904875 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || |||| || ||| |||||||| ||| | || || || Sbjct 904876 AGACACAATTGAAAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCTGACCA 904935 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 |||| | ||||||||||| |||||||| |||||||| ||| | | ||||| || Sbjct 904936 ACAGCGTCTTATCTTTGCTGGCAAACAGCTGGAAGATGGACGTACTCTTTCTGATTACAA 904995 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||| |||||||| ||| |||| | | || ||||||| || Sbjct 904996 TATTCAAAAAGAGTCTACTCTTCACTTGGTCCTGCGTCTAAGAGGAGGAAT 905046 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||||||||| | || ||||||||||| || || ||| | ||| Sbjct 905273 ATGCAAATTTTTGTAAAAACTCTGACTGGTAAAACCATCACTCTGGAGGTTGAAGCATCA 905332 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || |||||| |||||||| || | || ||||||| Sbjct 905333 GATACCATTGAAAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 905392 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | || || || || || || ||| |||||||| | ||| || | ||||| ||| Sbjct 905393 CAGCGTCTGATTTTCGCAGGAAAGCAACTGGAAGATGGAAGAACCCTGTCTGATTACAAC 905452 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 || ||||||||||| ||||| || Sbjct 905453 ATCCAAAAAGAATCAACTCTCCA 905475 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| || ||||| ||||| || || || |||||||| || ||| ||| | Sbjct 904586 AAGATGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTCTGGAAGTGGAGGCC 904645 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 ||||| || | | || |||| |||||| |||||||||||| | || |||| Sbjct 904646 TCAGACACCATTGAAAATGTCAAAGCTAAAATCCAGGACAAAGAGGGAATTCCTCCAGAT 904705 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || ||| | ||||||||||| || |||||||| |||||| ||| | | || || Sbjct 904706 CAGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGACTAC 904765 Query 28731 AACATTCAAAAAGAATCTACTCTGCA 28756 || ||||| || || || ||||| || Sbjct 904766 AATATTCAGAAGGAGTCAACTCTTCA 904791 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| || || || || || || ||||| ||| || ||| |||| Sbjct 905044 AATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCTTGGAGGTTGAAGCTTC 905103 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || ||||| |||||| ||||||||||| | || ||| || Sbjct 905104 AGACACAATTGAAAATGTCAAGGCCAAAATCCAGGACAAAGAGGGTATCCCTCCAGACCA 905163 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | || || ||||| ||||| || | ||||| | |||| | | ||||| || Sbjct 905164 GCAGCGTCTGATTTTTGCTGGCAAGCAGCTTGAAGACGGAAGAACTCTTTCTGATTACAA 905223 Query 28733 CATTCAAAAAGAATCTACTCTGCA 28756 ||| || |||||||| || || || Sbjct 905224 CATCCAGAAAGAATCAACGCTCCA 905247 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| || || || || |||||||| ||| || |||| Sbjct 905501 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905560 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || || | || |||||||| || | || || || Sbjct 905561 GATACTATCGAAAATGTCAAAGCCAAGATTCAA-GACAAAGAAGGCATCCCTCCTGACCA 905619 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | || || ||||| || |||||| |||||||| | ||| || | ||||| || Sbjct 905620 ACAACGTCTCATATTTGCTGGTAAACAACTGGAAGATGGCAGAACCCTGTCTGATTACAA 905679 Query 28733 CATTCAAAAAGAATCTACTCTGCA 28756 ||| ||||||||||| || || || Sbjct 905680 CATCCAAAAAGAATCAACACTCCA 905703 >seq3620 Length=288302 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || ||| | |||||||||||||| || ||| || |||| Sbjct 89808 ATGCAGATCTTCGTTAAGACACTCACGGGTAAAACCATCACACTTGAAGTCGAGGCTTCC 89867 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | || | ||| ||||| |||||||||||| | || ||| || Sbjct 89868 GACACGATCGAAAATGTGAAGGCTAAAATTCAGGACAAAGAGGGAATCCCACCAGACCAG 89927 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| | ||||| || || |||||||| || ||| || || | || |||||| Sbjct 89928 CAGAGGTTGATCTTCGCTGGAAAACAATTAGAGGATGGGCGCACATTGTCAGACTATAAC 89987 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||||||||| || ||||| ||||||| || | || ||||| || Sbjct 89988 ATACAAAAAGAATCCACGCTGCATTTGGTATTGCGACTTCGTGGAGGTAT 90037 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || || || || || |||||||| || ||| || | || Sbjct 91632 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAAACCATCACACTTGAAGTCGAGGCCTCT 91691 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | || ||||| |||||| |||||||||||| | || ||| || Sbjct 91692 GATACGATCGAAAATGTCAAGGCTAAAATCCAGGACAAAGAGGGAATCCCTCCAGACCAG 91751 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | | |||||||| || ||||||||||||||| | || | |||| || || Sbjct 91752 CAGCGTTTAATCTTTGCCGGAAAACAATTGGAAGATGGTCGTACGCTCTCCGACTACAAT 91811 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||||||||||||||||| || ||| |||| ||| Sbjct 91812 ATTCAAAAAGAATCTACACTCCACTTGGTCTTA 91844 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || | || || ||||| ||||| ||| ||| |||| Sbjct 89580 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89639 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | || ||||| || || |||||||| || | ||| |||||| Sbjct 89640 GATACGATTGAGAATGTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCCCCAGATCAG 89699 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || || ||||| || || ||| | |||||| || || | || || ||| Sbjct 89700 CAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACAAC 89759 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTA 28763 |||||||| ||||| || || ||| | ||| Sbjct 89760 ATTCAAAAGGAATCCACACTTCACCTTGTA 89789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425379333141648