Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq2005 132 7e-26 seq3620 93.3 6e-14 >seq2005 Length=1592806 Score = 132 bits (146), Expect = 7e-26 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | ||||| ||||||||||| || ||||| || ||||| || | |||| Sbjct 905501 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905560 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||| || ||| || || ||||| ||||||||||| ||||| || ||| Sbjct 905561 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905620 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | || | ||| ||||| || || |||||| |||||| | || ||||| | Sbjct 905621 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGATGGCAGAACCCTGTCTGATTACA-- 905678 Query 156003 ATATCCAAAGAG 156014 | ||||||| || Sbjct 905679 ACATCCAAAAAG 905690 Score = 127 bits (140), Expect = 3e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| ||||||||||||||||||| || ||||| | || || |||| ||| Sbjct 904816 AATGCAAATCTTTGTTAAAACATTGACTGGAAAGACCATTACCCTGGAGGTTGAAGCTTC 904875 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| ||| || ||| ||| || ||||| |||||||| || ||||| || || Sbjct 904876 AGACACAATTGAAAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCTGACCA 904935 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| | | || | ||| || || ||||| |||||| | ||| | || ||||| || Sbjct 904936 ACAGCGTCTTATCTTTGCTGGCAAACAGCTGGAAGATGGACGTACTCTTTCTGATTACAA 904995 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 ||| |||||| | || ||||| || || | | ||||||| || Sbjct 904996 TATTCAAAAAGAGTCTACTCTTCACTTGGTCCTGCGTCTAAGAGGAGG 905043 Score = 109 bits (120), Expect = 8e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | || || ||||||||||| || || || || || || |||| ||| Sbjct 905044 AATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCTTGGAGGTTGAAGCTTC 905103 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| ||| || || ||||| || || ||||| || || |||||||| || Sbjct 905104 AGACACAATTGAAAATGTCAAGGCCAAAATCCAGGACAAAGAGGGTATCCCTCCAGACCA 905163 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || | |||||| ||| || |||||||| ||||| |||||| | || ||||| || Sbjct 905164 GCAGCGTCTGATTTTTGCTGGCAAGCAGCTTGAAGACGGAAGAACTCTTTCTGATTACAA 905223 Query 156002 TATATCCAAAGAGGCGACGCTTCAT 156026 || ||||| | ||||| ||| Sbjct 905224 CATCCAGAAAGAATCAACGCTCCAT 905248 >seq3620 Length=288302 Score = 93.3 bits (102), Expect = 6e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || ||||| || || | ||||| ||||||| || || || || | || || || | | Sbjct 89121 AACATGCAGATTTTCGTGAAAACCCTGACTGGGAAGACCATCACCCTCGAGGTTGAGGCT 89180 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | ||| || || || || || |||||||| |||||||| || ||||| Sbjct 89181 TCCGACACTATCGAGAATGTCAAGGCCAAGATCCAAGATAAGGAAGGCATTCCCCCAGAC 89240 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || || || ||||| | || || ||||||||||||||| | ||| | || || || Sbjct 89241 CAGCAGAGGTTGATCTTCGCTGGCAAGCAGCTCGAAGATGGACGTACTCTGTCCGACTAC 89300 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||||| ||||| | || ||||| || || || | || ||||| ||| Sbjct 89301 AATATTCAAAAAGAATCTACACTTCACTTGGTCTTGCGTTTGAGAGGTGGT 89351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731827063059200