Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3484 134 2e-25 seq2352 113 6e-19 seq1247 107 2e-17 seq704 107 2e-17 seq4696 102 1e-15 >seq3484 Length=4033909 Score = 134 bits (148), Expect = 2e-25 Identities = 156/209 (75%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGC---ACGGCGGTCTGGATCTCGCGCGTGC 1254399 || |||||||||| ||| | || |||| || ||||| ||||||||||| || | | Sbjct 2610984 GCTTGGCCAGTTCACCGGG---GAGCAGGAGCCTGACGGCCGTCTGGATCTCCCGGGAGG 2611040 Query 1254400 CGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 ||| || | |||||| |||| ||||| ||| |||||||| | ||||||| |||| Sbjct 2611041 TGATGGTCGACCTCTTGTTGTAGTGGGCCAGCCGGGAGGCCTCGGCGGCGATGCGCTCGA 2611100 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 ||||||||||| || |||||||| ||| | |||| | || | ||| ||||| Sbjct 2611101 AGATGTCGTTGACGAAGCTGTTCATGATGCTCATGGCCTTGCTCGACACGCCGGTGTCGG 2611160 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| |||||||| ||||||||||||||| Sbjct 2611161 GGTGGACCTGCTTCAGCACCTTGTAGATG 2611189 >seq2352 Length=3906906 Score = 113 bits (124), Expect = 6e-19 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| | | | || || ||||| ||||| ||||| || | | || Sbjct 2233600 GCTTGGCCAGTTCACCGGGGAGCAGAAGCCGAACGGCCGTCTGAATCTCCCGGGAGGTGA 2233541 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || | |||||| | || |||||||| ||||||| | ||||||| |||| | Sbjct 2233540 TGGTCGATCTCTTGTTGTAATGGGCCAGACGCGAAGCCTCGGCGGCGATGCGCTCGAAGA 2233481 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||| ||| | |||| |||||| || |||||| | Sbjct 2233480 TGTCGTTGACGAAGCTGTTCATGATACTCATGGCCTTGCTGGAGACTCCNGTGTCGGGAT 2233421 Query 1254523 GCACCTGCTTGAGCACCTT 1254541 | |||||||| |||||||| Sbjct 2233420 GGACCTGCTTCAGCACCTT 2233402 Score = 100 bits (110), Expect = 3e-15 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 1254413 CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGAC 1254472 |||||| | || |||||||| ||||||| | ||||||| |||| |||||||| || Sbjct 2164101 CTTGTTGTAATGGGCCAGACGCGAAGCCTCGGCGGCGATGCGCTCGAAGATGTCGTTTAC 2164160 Query 1254473 AAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTT 1254532 ||| |||||||| ||| | |||| |||||| || |||||| || |||||||| Sbjct 2164161 AAAGCTGTTCATGATACTCATGGCCTTGCTGGAGACTCCAGTGTCGGGATGGACCTGCTT 2164220 Query 1254533 GAGCACCTTGTAGAT 1254547 |||||||||||||| Sbjct 2164221 CAGCACCTTGTAGAT 2164235 >seq1247 Length=9620 Score = 107 bits (118), Expect = 2e-17 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 1254375 ACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGG 1254434 || |||||||||||||| || | | ||| || | |||||| |||| ||||| ||| Sbjct 9242 ACAGCGGTCTGGATCTCCCGGGAGGTGATGGTCGACCTCTTGTTGTAGTGGGCCAGGCGG 9183 Query 1254435 CCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATC 1254494 ||| |||| | ||||||| |||| ||||||||||| || |||||||| ||| Sbjct 9182 GAGGCTTCGGCGGCGATGCGCTCGAAGATGTCGTTGACGAAGCTGTTCATGATGCTCATG 9123 Query 1254495 GACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||| | || | || ||| ||||| |||||||| | ||||||||||||| Sbjct 9122 GCCTTGCTCGAAACACCGGTGTCAGGGTGGACCTGCTTCAACACCTTGTAGATG 9069 >seq704 Length=1071093 Score = 107 bits (118), Expect = 2e-17 Identities = 150/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGC---ACGGCGGTCTGGATCTCGCGCGTGC 1254399 || |||| ||||| ||| | || |||| || ||||||||||||||||| || | | Sbjct 151357 GCTTGGCGAGTTCACCGGG---GAGCAGGAGCCTGACGGCGGTCTGGATCTCCCGGGAGG 151301 Query 1254400 CGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 ||| || | |||||| |||| |||||||| ||||| | ||||||| |||| Sbjct 151300 TGATGGTCGACCTCTTGTTGTAGTGAGCCAGACGCGAAGCCTCAGCAGCGATGCGCTCGA 151241 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 ||||||||||| || |||||||| ||| | |||| | |||| || ||||| Sbjct 151240 AGATGTCGTTGACGAAGCTGTTCATGATGCTCATGGCCTTGCTCGAGACACCAGTGTCGG 151181 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 | || || ||||| ||||| ||||||||| Sbjct 151180 GATGGACTTGCTTCAGCACTTTGTAGATG 151152 >seq4696 Length=9412112 Score = 102 bits (112), Expect = 1e-15 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| |||||||| | | | || | || |||||||||||||| || | | || Sbjct 8618974 GCTTGGCGAGTTCGCCAGGAAGCAAAAGCCTGACAGCGGTCTGGATCTCCCGGGAGGTGA 8619033 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || | ||| || |||| || || || ||| |||| | ||||||| |||| | Sbjct 8619034 TGGTCGACCTCTTATTGTAGTGAGCTAGGCGAGAGGCTTCGGCGGCGATGCGCTCGAAGA 8619093 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||| ||||| |||| | |||| || ||| |||| Sbjct 8619094 TGTCGTTGACGAAGCTGTTCATGATGCTCATCGCCTTGCTCGAGACACCGGTGTCCGGGT 8619153 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| |||||||| || ||| Sbjct 8619154 GGACCTGCTTCAGCACCTTATAAATG 8619179 Score = 91.5 bits (100), Expect = 2e-12 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCC 1254428 || || || |||||||| ||||| |||| | || || | |||||| || | Sbjct 6043353 AGCCGGACAGCGGTCTGTATCTCCCGCGAGGTTATGGTACTCTTCTTGTTGTAGCCAGAT 6043412 Query 1254429 AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACC 1254488 ||||| ||||||| ||||||| |||| |||||||||| || |||||||| Sbjct 6043413 AGACGAGAGGCCTCGCCAGCGATGCGCTCGAAGATGTCGTTGATGAAGCTGTTCATGATG 6043472 Query 1254489 GACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGA 1254546 ||||| |||| | ||||| ||| || ||||| |||||||| ||||||||||||| Sbjct 6043473 CTCATCGCCTTGCTCGAGATTCCCGTATCCGGGTGAACCTGCTTCAGCACCTTGTAGA 6043530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106736098277104