Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq4142 215 4e-51 seq2005 134 1e-26 seq3620 86.0 5e-12 seq4270 82.4 6e-11 >seq4142 Length=1590842 Score = 215 bits (238), Expect = 4e-51 Identities = 240/319 (75%), Gaps = 6/319 (2%) Strand=Plus/Minus Query 34317 CTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAG 34376 ||| ||||| |||||||| || | || || | ||| |||| | |||||| || || || Sbjct 975000 CTCGGTCTCGGGGTTGTCGCAGTTGGGGCAGAGCACGTACTTCCTGATGAAGCCGTCGAG 974941 Query 34377 CAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTA 34436 ||| ||||| | || || |||||| |||||||||||| || || || |||||| | Sbjct 974940 CAGATCCTGCAGTTTCGAGGCGTCGTGACTGCCGTTGACGATAAAACGCTCATTTTTGAA 974881 Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496 || | ||| || || || ||||||||||| || ||| |||| ||||| || | || || Sbjct 974880 GTCAAACTGGGTCTGAGCACCCAGCTCGCATCCAAAGAACTTGGTCGGATACGTAGCTGG 974821 Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556 || || | |||||||||| ||| ||| ||||||||||||||||| ||||||||||| Sbjct 974820 GCGGCCGATAGCCTTGGCGACTTCAACCATATTGACGATGACAGTCTTAATGCCGTTGCC 974761 Query 34557 CTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTC-----C 34611 || || |||||||| || |||||||||||||||||||| ||||| || || | Sbjct 974760 TTTGCCCTCGACCTTCGCCTGAATGCGCGGCATTTTGTAGCGATAGAAGGCATCGCTGAC 974701 Query 34612 GCCAC-ATTGCGGTTAACG 34629 ||||| ||| ||||||| Sbjct 974700 GCCACGATTTACGTTAACG 974682 >seq2005 Length=1592806 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||||||||| || || || |||||||| | ||| ||| || Sbjct 905501 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905560 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| ||| | || ||| |||||| |||||||||||| | || || ||| Sbjct 905561 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905620 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | ||| |||||||| ||||| |||| |||||| || | ||||||||| Sbjct 905621 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGATGGCAGAACCCTGTCTGATTACAAC 905680 Query 110453 ATTCAAAAAGAATCTAC 110469 || ||||||||||| || Sbjct 905681 ATCCAAAAAGAATCAAC 905697 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || |||||||| |||||||| |||||||| ||| | ||| || || Sbjct 905956 AATGCAAATTTTCGTCAAAACCTTAACCGGTAAAACCATAACCTTAGAAGTTGAAGCTTC 906015 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||| ||| ||| | || ||| || ||| || || |||||| | || || || Sbjct 906016 CGACACTATCGAAAACGTCAAAGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCA 906075 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | || || | ||| ||||||||||||||||||| || || | | || ||||| Sbjct 906076 GCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAA 906135 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 |||||||||||| || ||| | || |||| | | ||| |||| |||| Sbjct 906136 CATTCAAAAAGAGTCCACGCTCCATCTGGTACTTCGTCTGAGAGGAGGAA 906185 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || || |||||||| |||||||| |||||||| ||| | ||| || || Sbjct 906184 AATGCAGATTTTCGTCAAAACCTTAACCGGTAAAACCATAACCTTAGAAGTTGAAGCTTC 906243 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||| ||| ||| | || ||| || ||| || || |||||| | || || || Sbjct 906244 CGACACTATCGAAAACGTCAAAGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCA 906303 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | || || | ||| ||||||||||||||||||| || || | | || ||||| Sbjct 906304 GCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAA 906363 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||| ||||| || || || || || |||| || | || || || |||| Sbjct 906364 CATCCAAAAGGAGTCCACCTTACATTTGGTCTTGCGTCTTCGCGGAGGAA 906413 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| ||||| || || || || ||||||||| | || || || Sbjct 904816 AATGCAAATCTTTGTTAAAACATTGACTGGAAAGACCATTACCCTGGAGGTTGAAGCTTC 904875 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | || ||| ||||| ||||||||||| | || || || Sbjct 904876 AGACACAATTGAAAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCTGACCA 904935 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | ||||| | ||| || ||||||||||| |||| | || | | |||||||| Sbjct 904936 ACAGCGTCTTATCTTTGCTGGCAAACAGCTGGAAGATGGACGTACTCTTTCTGATTACAA 904995 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||||||||| ||||| | ||| |||| Sbjct 904996 TATTCAAAAAGAGTCTACTCTTCACTTGGT 905025 >seq3620 Length=288302 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || || | || |||||||| ||||| | ||| || || Sbjct 89580 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89639 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || || |||||| ||||||||||| | ||| ||||| Sbjct 89640 GATACGATTGAGAATGTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCCCCAGATCAG 89699 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || |||| ||| ||||| || || || |||| | ||| || | || |||||| Sbjct 89700 CAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACAAC 89759 Query 110453 ATTCAAAAAGAATCTAC 110469 |||||||| ||||| || Sbjct 89760 ATTCAAAAGGAATCCAC 89776 >seq4270 Length=22512 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTG 110330 ||||||||| |||||||||||||| || ||||| ||||| || | || || ||| | Sbjct 4801 AATGCAAATTTTTGTCAAAACTTTGACAGGCAAGACCATAACTTTAGAGGTCGAAGCTTC 4742 Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390 | |||||| | | | || ||| || || || || ||||| | || |||| Sbjct 4741 A-GATACTATAGAAAATGTTAAAGCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGATC 4683 Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450 |||| || | |||| ||| || |||||| | ||||||| ||||| | | ||||||| Sbjct 4682 AACAGCGATTGATTTTTGCTGGCAAACAGTTAGAGGATGGTCGAACATTATCCGATTACA 4623 Query 110451 ACATTCAAAAAG 110462 |||| || |||| Sbjct 4622 ACATACAGAAAG 4611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412816885237616