Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq2005 123 4e-23 seq3620 105 1e-17 >seq2005 Length=1592806 Score = 123 bits (136), Expect = 4e-23 Identities = 165/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| || ||||||| | || || ||||| || ||| | || || ||| ||| | Sbjct 905274 TGCAAATTTTTGTAAAAACTCTGACTGGTAAAACCATCACTCTGGAGGTTGAAGCATCA- 905332 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| ||||||| ||| ||||| ||| |||||||| || ||||| |||||| Sbjct 905333 GATACCATTGAAAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 905392 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || | || ||||| ||||| || ||| | || ||| ||||| | | ||||| || Sbjct 905393 CAGCGTCTGATTTTCGCAGGAAAGCAACTGGAAGATGGAAGAACCCTGTCTGATTACAAC 905452 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || ||||||||||| ||| ||||| | || | || | ||||||| Sbjct 905453 ATCCAAAAAGAATCAACTCTCCATCTTGTTCTTCGTCTTCGAGGAGG 905499 Score = 123 bits (136), Expect = 4e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| || || ||||| || |||||| | || ||||| | | Sbjct 905502 TGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCTG 905561 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| ||||||| ||| || || ||| ||||||||||| || || || |||| Sbjct 905562 ATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAAC 905621 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||| ||||| ||||||||| | || ||| ||||| | | ||||| || | Sbjct 905622 AACGTCTCATATTTGCTGGTAAACAACTGGAAGATGGCAGAACCCTGTCTGATTACAACA 905681 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | ||||||||||| || ||||| Sbjct 905682 TCCAAAAAGAATCAACACTCCAT 905704 Score = 87.8 bits (96), Expect = 3e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| || || | ||||| || || || ||||| || ||| | || || || | | | Sbjct 904590 TGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTCTGGAAGTGGAGGCCTCA- 904648 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| ||||||| ||| |||||| || ||||| || ||||| || ||||| Sbjct 904649 GACACCATTGAAAATGTCAAAGCTAAAATCCAGGACAAAGAGGGAATTCCTCCAGATCAG 904708 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || | || || ||||| |||||||||||||| ||| | || | | || || ||| Sbjct 904709 CAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGACTACAAT 904768 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 || || || || || ||| | ||| |||| || || Sbjct 904769 ATTCAGAAGGAGTCAACTCTTCATCTAGTCTTGCG 904803 Score = 84.2 bits (92), Expect = 3e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| | || || || || |||||| | || ||||| || Sbjct 905730 TGCAAATTTTCGTCAAAACTCTGACTGGCAAGACCATTACTCTGGAAGTAGAGGCCTCCG 905789 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| ||| ||||| || |||||||| ||||| || || || | Sbjct 905790 ACACCATTGAAAATGTTAAAGCCAAAATTCAGGACAAAGAAGGAATTCCTCCAGACCAGC 905849 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGA 146185 | | || || ||||| |||||||||||||| || Sbjct 905850 AGCGTCTTATCTTTGCTGGTAAACAATTAGAAGA 905883 >seq3620 Length=288302 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || ||| | || || ||||| || || |||| || || | || Sbjct 89809 TGCAGATCTTCGTTAAGACACTCACGGGTAAAACCATCACACTTGAAGTCGAGGCTTCCG 89868 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| || |||||| || ||||| || || ||||| || || | Sbjct 89869 ACACGATCGAAAATGTGAAGGCTAAAATTCAGGACAAAGAGGGAATCCCACCAGACCAGC 89928 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | || || || || ||||||||||| ||| | || || |||| ||||| | Sbjct 89929 AGAGGTTGATCTTCGCTGGAAAACAATTAGAGGATGGGCGCACATTGTCAGACTATAACA 89988 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 ||||||||||||| || | ||||| ||||| ||| | | ||||||| Sbjct 89989 TACAAAAAGAATCCACGCTGCATTTGGTATTGCGACTTCGTGGAGGTA 90036 Score = 93.3 bits (102), Expect = 7e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || || |||||||||||| | || || ||| | | Sbjct 89581 TGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCTG 89640 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || ||| || ||| |||||||| ||||| || ||||| | Sbjct 89641 ATACGATTGAGAATGTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCCCCAGATCAGC 89700 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| ||||| ||| | || ||| | || || | || || || | Sbjct 89701 AGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACAACA 89760 Query 146212 TACAAAAAGAATCGAC 146227 | ||||| ||||| || Sbjct 89761 TTCAAAAGGAATCCAC 89776 Score = 86.0 bits (94), Expect = 1e-11 Identities = 162/237 (68%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || ||||| || || |||| || || | Sbjct 91633 TGCAGATCTTCGTCAAGACCTTGACTGGCAAAACCATCACACTTGAAGTCGAGGCCTCTG 91692 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| || |||||| || ||||| || || || || || || | Sbjct 91693 ATACGATCGAAAATGTCAAGGCTAAAATCCAGGACAAAGAGGGAATCCCTCCAGACCAGC 91752 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | || ||||| || |||||||| || ||| | | ||| | | || || |||| Sbjct 91753 AGCGTTTAATCTTTGCCGGAAAACAATTGGAAGATGGTCGTACGCTCTCCGACTACAATA 91812 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATAT 146268 | ||||||||||| || |||| || || ||||| | || || || |||| ||||| Sbjct 91813 TTCAAAAAGAATCTACACTCCACTTGGTCTTACGTCTTAGGGGTGG-AAATTAATAT 91868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786118129383040