Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq2005 120 2e-22 seq3620 82.4 6e-11 >seq2005 Length=1592806 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| ||||| |||||||| ||||||||||| ||||| ||| | Sbjct 905501 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905560 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || | | | || ||| || ||| |||||||||||| | || ||| ||| Sbjct 905561 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905620 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || || | ||| || |||||| | |||||| | ||| || ||||||||| Sbjct 905621 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGATGGCAGAACCCTGTCTGATTACAAC 905680 Query 106440 ATACAAAAAGAATCTACACTACAT 106463 || ||||||||||| ||||| ||| Sbjct 905681 ATCCAAAAAGAATCAACACTCCAT 905704 Score = 87.8 bits (96), Expect = 1e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||||||||| || ||||| ||||||||||||||||||| ||||| ||| || Sbjct 905728 AATGCAAATTTTCGTCAAAACTCTGACTGGCAAGACCATTACTCTGGAAGTAGAGGCCTC 905787 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || ||| |||||| ||||||||||| | || || || Sbjct 905788 CGACACCATTGAAAATGTTAAAGCCAAAATTCAGGACAAAGAAGGAATTCCTCCAGACCA 905847 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGA 106414 || | ||||| | ||| || |||||||||||||| Sbjct 905848 GCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGA 905883 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| ||||| ||||||| || ||||| || |||| ||| | Sbjct 905273 ATGCAAATTTTTGTAAAAACTCTGACTGGTAAAACCATCACTCTGGAGGTTGAAGCATCA 905332 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || ||| ||||| ||||||||||| | || |||||| Sbjct 905333 GATACCATTGAAAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 905392 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | || |||| || || || ||| | |||||| | ||| || ||||||||| Sbjct 905393 CAGCGTCTGATTTTCGCAGGAAAGCAACTGGAAGATGGAAGAACCCTGTCTGATTACAAC 905452 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| || || ||| | || | | | |||||||| Sbjct 905453 ATCCAAAAAGAATCAACTCTCCATCTTGTTCTTCGTCTTCGAGGAGG 905499 >seq3620 Length=288302 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || | |||||||| || ||||| ||||| ||| | Sbjct 89580 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89639 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || || || ||| ||||||||||| | ||| ||||| Sbjct 89640 GATACGATTGAGAATGTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCCCCAGATCAG 89699 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| |||| ||| || || ||| | |||||| || || || |||||| Sbjct 89700 CAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACAAC 89759 Query 106440 ATACAAAAAGAATCTACACTACA 106462 || ||||| ||||| ||||| || Sbjct 89760 ATTCAAAAGGAATCCACACTTCA 89782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402305514538496