Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3484 141 1e-27 seq1247 122 1e-21 seq4696 114 2e-19 seq704 114 2e-19 seq2352 104 3e-16 >seq3484 Length=4033909 Score = 141 bits (156), Expect = 1e-27 Identities = 173/235 (74%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||||| |||||||| |||||| |||| | | || | |||| || Sbjct 2611188 ATCTACAAGGTGCTGAAGCAGGTCCACCCCGACACCGGCGTG------TCGAGCAAGGCC 2611135 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | |||||||| Sbjct 2611134 ATGAGCATCATGAACAGCTTCGTCAACGACATCTTCGAGCGCATCGCCGCCGAGGCCTCC 2611075 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT- 725089 || ||||| | || ||||||| | || ||| | | || ||||||||||| ||||| Sbjct 2611074 CGGCTGGCCCACTACAACAAGAGGTCGACCATCACCTCCCGGGAGATCCAGACGGCCGTC 2611015 Query 725090 --GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || |||| || | ||| |||||||||| |||||||||| |||||||||| Sbjct 2611014 AGGCTCCTGCTC---CCCGGTGAACTGGCCAAGCACGCCGTCAGTGAGGGCACCA 2610963 >seq1247 Length=9620 Score = 122 bits (134), Expect = 1e-21 Identities = 166/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | |||||||| ||||| |||| || || | |||| || Sbjct 9070 ATCTACAAGGTGTTGAAGCAGGTCCACCCTGACACCGGTGTT------TCGAGCAAGGCC 9123 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | |||| ||| Sbjct 9124 ATGAGCATCATGAACAGCTTCGTCAACGACATCTTCGAGCGCATCGCCGCCGAAGCCTCC 9183 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||| | || ||||||| | || ||| | | || |||||||||||||| || Sbjct 9184 CGCCTGGCCCACTACAACAAGAGGTCGACCATCACCTCCCGGGAGATCCAGACCGCTGTC 9243 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || | | | |||||| || || | |||||||||| |||||| |||| Sbjct 9244 AGGCTCCTGCTTCCCGGCGAGCTCGCTAAGCACGCCGTCAGCGAGGGTACCA 9295 >seq4696 Length=9412112 Score = 114 bits (126), Expect = 2e-19 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || || |||||||| |||||||| ||||| |||| || ||| | |||| | Sbjct 8619178 ATTTATAAGGTGCTGAAGCAGGTCCACCCGGACACCGGTGT------CTCGAGCAAGGCG 8619125 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | |||| ||| | Sbjct 8619124 ATGAGCATCATGAACAGCTTCGTCAACGACATCTTCGAGCGCATCGCCGCCGAAGCCTCT 8619065 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||||| || | || ||| ||| | || ||| | | || |||||||||||||| || Sbjct 8619064 CGCCTAGCTCACTACAATAAGAGGTCGACCATCACCTCCCGGGAGATCCAGACCGCTGTC 8619005 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 | || | | | |||||||| |||| |||||||||| |||||| || Sbjct 8619004 AGGCTTTTGCTTCCTGGCGAACTCGCCAAGCACGCCGTCAGCGAGGGTAC 8618955 Score = 93.3 bits (102), Expect = 6e-13 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 ||||||||||||| |||||||| || ||| || || || | ||| | |||| | | Sbjct 6043530 TCTACAAGGTGCTGAAGCAGGTTCA-CCCGGATACG--GG---AATCTCGAGCAAGGCGA 6043477 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||| || |||||||||| |||| ||||||| ||||||| || Sbjct 6043476 TGAGCATCATGAACAGCTTCATCAACGACATCTTCGAGCGCATCGCTGGCGAGGCCTCTC 6043417 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 | || | ||| ||||||| | || || | |||| ||||| |||||||| || | Sbjct 6043416 GTCTATCTGGCTACAACAAGAAGAGTACCATAACCTCGCGGGAGATACAGACCGCTGTCC 6043357 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || | | | || || || |||| ||||||||| |||||| |||| Sbjct 6043356 GGCTTCTGCTTCCTGGTGAGCTCGCCAAGCACGCCGTTAGCGAGGGTACCA 6043306 >seq704 Length=1071093 Score = 114 bits (126), Expect = 2e-19 Identities = 167/235 (71%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| ||||| ||||| || || ||| || | || ||| | |||| || Sbjct 151153 ATCTACAAAGTGCTGAAGCAAGTCCATCCCGACACTGGTGT------CTCGAGCAAGGCC 151206 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | ||||| Sbjct 151207 ATGAGCATCATGAACAGCTTCGTCAACGACATCTTCGAGCGCATCGCTGCTGAGGCTTCG 151266 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT- 725089 || ||||| | || ||||||| | || ||| | | || ||||||||||||||||| Sbjct 151267 CGTCTGGCTCACTACAACAAGAGGTCGACCATCACCTCCCGGGAGATCCAGACCGCCGTC 151326 Query 725090 --GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || |||| || | ||| ||||| |||| |||||||||| ||| ||||||| Sbjct 151327 AGGCTCCTGCTC---CCCGGTGAACTCGCCAAGCACGCCGTCAGCGAAGGCACCA 151378 >seq2352 Length=3906906 Score = 104 bits (114), Expect = 3e-16 Identities = 158/226 (70%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 724917 AAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTCG 724976 |||||||| |||||||| || ||| || | | ||||| |||| ||||| Sbjct 2233402 AAGGTGCTGAAGCAGGTCCATCCCGACACNGGAGT------CTCCAGCAAGGCCATGAGT 2233455 Query 724977 ATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTG 725036 ||||||||| || ||||||||||| |||| ||||||| | ||||||| || ||| Sbjct 2233456 ATCATGAACAGCTTCGTCAACGACATCTTCGAGCGCATCGCCGCCGAGGCTTCGCGTCTG 2233515 Query 725037 GCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTG 725096 || | | ||||||| | || ||| | | || ||||| ||||| ||||| || || Sbjct 2233516 GCCCATTACAACAAGAGATCGACCATCACCTCCCGGGAGATTCAGACGGCCGTTCGGCTT 2233575 Query 725097 ATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | | ||| |||||||||| |||||| || || ||||||| Sbjct 2233576 CTGCTCCCCGGTGAACTGGCCAAGCACGCTGTGAGTGAAGGCACCA 2233621 Score = 91.5 bits (100), Expect = 2e-12 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 724995 AACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGC 725054 |||||||| |||| ||||||| | ||||||| |||||||| | || ||||||| | Sbjct 2710817 AACGACATCTTCGAGCGCATCGCCGCCGAGGCTTCGCGCCTGGCTCACTACAACAAGAGG 2710758 Query 725055 AACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTG 725114 ||| ||| | | || ||||||||||| ||||| | || | | | ||| |||||| Sbjct 2710757 TCCACCATCACCTCCCGGGAGATCCAGACTGCCGTCAGGCTTCTGCTCCCCGGTGAACTG 2710698 Query 725115 GCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||| |||||| || ||| ||||||| Sbjct 2710697 GCCAAGCACGCTGTGAGCGAAGGCACCA 2710670 Score = 87.8 bits (96), Expect = 3e-11 Identities = 108/145 (74%), Gaps = 6/145 (4%) Strand=Plus/Minus Query 724907 CTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAA 724966 || ||||||||||||||| |||||||| || ||||| | ||| | ||||| ||| Sbjct 2164239 CTATATCTACAAGGTGCTGAAGCAGGTCCA-TCCCGA--CACTGG---AGTCTCCAGCAA 2164186 Query 724967 GTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGC 725026 | ||||| ||||||||| ||||| |||||||| |||| ||||||| | ||||||| Sbjct 2164185 GGCCATGAGTATCATGAACAGCTTTGTAAACGACATCTTCGAGCGCATCGCCGCCGAGGC 2164126 Query 725027 CGGTCGCCTGGCGCGCTCCAACAAG 725051 || ||||| | | ||||||| Sbjct 2164125 TTCGCGTCTGGCCCATTACAACAAG 2164101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177337428571744