Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4696 221 2e-52 seq1332 111 2e-19 seq4429 84.2 3e-11 >seq4696 Length=9412112 Score = 221 bits (244), Expect = 2e-52 Identities = 324/456 (71%), Gaps = 2/456 (0%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || ||||| ||||||||||||||| |||||||||||||||| ||||||||| || | Sbjct 481928 TCAAATTCTTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACACATTAAACTC 481987 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AA 69635 || || || ||||| ||||| || | || || ||||| | ||| ||| || Sbjct 481988 CATTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAAGC-ATAGAA 482046 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 || ||||| | ||| |||||||| || ||||| || ||||| ||||||||||| || | Sbjct 482047 AAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAGAAATTCGAA 482106 Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755 || |||| |||||| ||||| | ||| || || | |||| |||| || ||||| || Sbjct 482107 GATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACC 482166 Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815 ||||| | ||| | ||||||||||| || ||||| | ||| |||| | ||||||||| Sbjct 482167 TTGATCAACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGA 482226 Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACC 69875 | || ||||| |||||||| | | || | || | ||| | || | | ||| Sbjct 482227 TACGCCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAACC 482286 Query 69876 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTC 69935 || || || || ||| || || |||||| | |||| ||| ||||| || || || Sbjct 482287 AATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATAAATTCCTTC 482346 Query 69936 TATGCTATCATCTATCATGTTAAGAAGAAAACAGCT 69971 || || || || |||| ||||||| ||||| || Sbjct 482347 AATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 482382 Score = 113 bits (124), Expect = 6e-20 Identities = 261/393 (66%), Gaps = 8/393 (2%) Strand=Plus/Plus Query 69115 ATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTA 69174 ||||| || || || || ||| | || || ||||| |||||||| || || || ||||| Sbjct 481443 ATACCAATGGGCCTGTGCCTCGTGTTGGACCTTTCTGCTTCTGGGATGGGGTAGTAATTT 481502 Query 69175 ATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGA 69234 | || |||||||||| | ||||| | ||||| || || ||||| ||||| | Sbjct 481503 AGGTCAATAATTTTATCCAAATTTCTTGTTGTGACTTTTACGACTTCCTTAAGTTTTGCA 481562 Query 69235 AAATCAAATCGTCCATCTA-------TAACAAACATATTCAGTGCTACAGATGCTAGATT 69287 ||||| | ||| | || | ||||||||||| | || | |||||||| ||| Sbjct 481563 AAATCGTA-CGTTTTTTTACTGGTATTTACAAACATATTAACGGCAATAGATGCTAAATT 481621 Query 69288 ACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACA 69347 || || ||||| || | | | | ||| || | | || || |||| |||||| | Sbjct 481622 GCACACGGCTACTTCGTCTGGAGAAGAATACTGCACAACTTCCGTGCATAAATTACTGCT 481681 Query 69348 TTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAAT 69407 | ||||||| || || ||||| ||||| || |||||| || ||||| | || Sbjct 481682 TCTGATAGTACCAAGGTTTTGTTGATTGGATTTGCGATTACAGTGATCTTTGTATAACAT 481741 Query 69408 AAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATT 69467 | || || |||||||||| ||||| | ||||| |||| | | | |||| Sbjct 481742 GTAAGGGGTTCCAGTTTCAACTTGAGACATTAAAATAGCAGTCCACAATTCTCGGGCATC 481801 Query 69468 TATTACGGTCTTGTAACGCTTCTCTTTTTCATA 69500 ||| |||||| || ||||||| ||||| Sbjct 481802 AATTTGTCGCTTGTAGCGTTTCTCTTCCTCATA 481834 >seq1332 Length=421543 Score = 111 bits (122), Expect = 2e-19 Identities = 187/271 (69%), Gaps = 6/271 (2%) Strand=Plus/Minus Query 69163 GGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCC 69222 ||||||| ||| | ||| |||||||||| | ||| | || |||||| || || Sbjct 276566 GGATAATGATTCAGATCAATAATTTTATCTAAATTCTTAGCAACAGTTTTAACAACTTCT 276507 Query 69223 TTTAGTTTGAGAAAATCAAA------TCGTCCATCTATAACAAACATATTCAGTGCTACA 69276 || | ||| | ||||| | | | || | |||||||||||| | || | Sbjct 276506 TTCAATTTTAAAAAATTGTAGTACTGTGTTTCAACATCAACAAACATATTAACAGCAATG 276447 Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACAT 69336 ||||||| |||||| |||||||| ||||| | | | |||||||| || || || ||| Sbjct 276446 GATGCTAAATTACATACTGCTACTTCATTTGGAGAAGAGTATTGTATAATTTCAGTGCAT 276387 Query 69337 AGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCC 69396 | |||||| | ||| ||||| || |||||||| ||||| || || |||| || Sbjct 276386 AAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATTTGATTTAAGATTGCAGGGATCT 276327 Query 69397 TTGTAAAGAATAAACGGAGTACCAGTTTCAA 69427 || || || ||| | ||||| |||||||||| Sbjct 276326 TTATAGAGCATATAAGGAGTTCCAGTTTCAA 276296 Score = 109 bits (120), Expect = 8e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 68653 TTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTA 68712 || || || ||||||| ||| | ||||||| |||||| | | | | ||| |||||| Sbjct 277243 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277184 Query 68713 ACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 68772 || || ||||| || || || || | | ||||||||||||||| || || || ||| Sbjct 277183 ACAATCATGAATTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTCC 277124 Query 68773 ACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGC 68825 || |||||||| ||||||| || ||||| || || || || ||||| ||||| Sbjct 277123 ACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTCGGCATTGGTGC 277071 Score = 93.3 bits (102), Expect = 6e-14 Identities = 192/286 (67%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 69970 CTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAAC 70029 || |||||||| || |||||||| | ||| | | | |||||||||||| || ||||| Sbjct 275510 CTGGACATTTGTTGGTGTATAGTACATGCAAAAGAAAGTGTAGGAGATGCATGTGTGAAG 275451 Query 70030 CATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATT 70089 | ||||||| ||| ||||| || || || ||| | |||| | ||||| Sbjct 275450 TAACGTTCAGAAGTATAATTATATGTCTCTATGACTTTTTCAAGATCCTCTTTATGAACA 275391 Query 70090 CCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTC 70149 ||| || || | ||| | ||||| || |||| || || || ||| || | Sbjct 275390 GCTACTGCAACTCTCATAAGCATATCTTGTGGTCACTCAACAACTTGTCCATTAATCCTG 275331 Query 70150 AACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCG 70209 || | ||| ||| |||| |||||||| ||||||||||| | ||| ||| | || Sbjct 275330 AATAAGTAACTTTTCTCCAAGGTTTTAAATCCAAAATAGTTAAAGACAAAATCTTTGTCA 275271 Query 70210 TAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATAT 70255 || || ||||||||||| |||| |||| ||| || ||||| Sbjct 275270 TAGTCTATGGCAGAATTTAGTCTATCTTTATGTTTTTGAATTATAT 275225 Score = 89.7 bits (98), Expect = 7e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 68946 TGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAA 69005 ||| ||||| || | ||| ||||| | | || || | ||||||||| || ||||| Sbjct 276862 TGAACCATTGTAAGAAAAATATGGTCCATTTTCTTTGGCCAATTCACAACTAGCTTCTAA 276803 Query 69006 TGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATC 69065 || || |||| | |||||||||||| | |||| || | || || ||| ||| || Sbjct 276802 AGCTCCAAAATATAATGTTTCGAAAATTTGAATATTTAGCTGCTGAGCCTCTTTACTCTC 276743 Query 69066 GAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACC 69119 ||||||||| || | | | ||| || || |||||||| || ||||| ||||| Sbjct 276742 GAATGGATAGTGCATTAACAAAAAAGCGTCCGCCAATCCTTGTACCCCGATACC 276689 >seq4429 Length=4547816 Score = 84.2 bits (92), Expect = 3e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 40112 TCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCA 40171 ||||||||||| ||||||||||||| || || || ||||||||||||| ||| || || Sbjct 2612468 TCTACTTCTTCCACTGTCCAAAACGAAGCTTCGGCTTTTTTGTACATGTGCCAAATGTCG 2612409 Query 40172 CGATATTGTATTGGAAAAATAACAAATCT 40200 | |||| |||||||| | |||||||| Sbjct 2612408 GGCCATTGGATTGGAAACAATACAAATCT 2612380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686866623799680