Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3321 143 2e-29 seq3545 102 6e-17 >seq3321 Length=1357463 Score = 143 bits (158), Expect = 2e-29 Identities = 206/289 (71%), Gaps = 6/289 (2%) Strand=Plus/Plus Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301 |||||| || ||| ||||| || || || || | |||||||||| || || || Sbjct 856740 AATTGGTGGTTTGGACAAAGAATTCAGTGCTATTTTCAGAAGAGCATTTGCATCACGAGT 856799 Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTA 19361 ||| || |||| || ||| |||||| ||||||||||| ||| || | |||||||| Sbjct 856800 ATTTCCTCCAGAAGTAGTTATACAATTAGGATGTAAACACGTTAAAGGTATCTTGCTTTA 856859 Query 19362 TGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAA---ATTACTTAC 19418 ||||||||| ||| || ||||| | || || ||| || || |||| || | | Sbjct 856860 TGGGCCACCTGGTACAGGTAAAACGCTCATGGCTAGACAAATTGGTAACATGTTGAATGC 856919 Query 19419 AAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATC 19478 || | || || |||||||| ||||| || |||||||| |||||||||| ||| | Sbjct 856920 AAGAGAA---CCAAAAATTGTCAATGGCCCACAAATCTTAGATAAATATGTTGGTGAGAG 856976 Query 19479 GGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAA 19527 |||| ||| | ||| | |||||||||| ||||| ||||| ||||| Sbjct 856977 TGAAGCCAATATCCGAAGACTGTTTGCTGATGCTGAGGAAGAGGAAAAA 857025 >seq3545 Length=1895843 Score = 102 bits (112), Expect = 6e-17 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 41003 CCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCACC 41062 |||||| |||||| ||||||| ||||| ||| || | | ||| ||||| | || || Sbjct 1750189 CCGACGAATAATAATGTGCGCCTGGAATCCAGTAGATATTCCTTTAATGGCTCTTCCTCC 1750248 Query 41063 TTGTCATTTGTTATG--TCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTAT 41120 |||||| | | || ||| |||| || |||| || || || ||||| ||||| Sbjct 1750249 GTGTCAT--GCTCTGGTTCAATTTTGTGTAGCTGATGGAGAGCTATCTTGTCAGCTGTAT 1750306 Query 41121 CAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTC 41180 |||||| | ||| |||||||| || ||||| || ||||| || |||| || ||||| Sbjct 1750307 CAAAGAAGTGCTGATATGGGACTTGGAGTCCCATTCAACATTGCCTCTTATTCTTTGCTC 1750366 Query 41181 ACGTATATGATTGCACACGTTACCAATTTAAA 41212 || | |||||||| || | || ||||| || Sbjct 1750367 ACATGCATGATTGCCCATATAACGAATTTGAA 1750398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397432206296560