Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq3545 138 9e-28 >seq3545 Length=1895843 Score = 138 bits (152), Expect = 9e-28 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 30239 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30298 ||||||||||||||||||||||| || || || || |||| ||| |||||||| || | Sbjct 1750026 GCTCCGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTATCG 1749967 Query 30299 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 30358 ||| || | |||||||| || | |||| ||||||| |||||| ||||| || Sbjct 1749966 GTGAACCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACGCCT 1749907 Query 30359 TTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 30418 || || | |||||||| | ||| ||||| || | | |||||| |||| |||||| || Sbjct 1749906 TTGTCGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCGACC 1749847 Query 30419 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459 || || ||||| || ||||||| || || || ||||| Sbjct 1749846 ACAGCACGCCAAAGAACGTTCTTGGTTGTCAGCAGAGGAAA 1749806 Score = 125 bits (138), Expect = 6e-24 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 |||||| ||||| || || || ||||||||||| || ||||| ||||| || || || Sbjct 330392 CATGTCGACGTACTTGGCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATC 330451 Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342 || || || | | || ||||| | |||| | || |||||||| |||||||||| Sbjct 330452 GCCTTCCTCGCGATCCTGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTC 330511 Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 30402 |||||| || || || || | || ||||| |||| ||| || || |||| || |||||| Sbjct 330512 CCAGATTTTCACGCCTTTGGCGGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCA 330571 Query 30403 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459 | || ||| || | || ||| ||| || || | ||| || ||||| || || || Sbjct 330572 GAACAACTCTTCTGCAACAGCCCGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 330628 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29954 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 30013 || || |||||| | ||||| | ||| || ||| ||||| || || || || || ||| Sbjct 1750383 TGGGCAATCATGCATGTGAGCAAAGAATAAGAGGCAATGTTGAATGGGACTCCAAGTCCC 1750324 Query 30014 ATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTC-GCTCACGTAAAACTG 30072 || || | || || || |||||||| || |||||||| || ||| || |||| || Sbjct 1750323 ATATCAGCACTTCTTTGATACAGCTGACAAGATAGCTCTCCATCAGCT-ACACAAAATTG 1750265 Query 30073 ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCA 30132 | || || || ||||||||||||||||| | | ||| || ||||||||||| Sbjct 1750264 AACCAGAGCATGACACGGAGGAAGAGCCATTAAAGGAATATCTACTGGATTCCAGGCGCA 1750205 Query 30133 CACGATGATGCGCCTGTCTTCTGGGTTGTT 30162 || || || || | ||| || || ||||| Sbjct 1750204 CATTATTATTCGTCGGTCGTCCGGTTTGTT 1750175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406286076227904