Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2005 141 6e-29 seq3620 107 1e-18 >seq2005 Length=1592806 Score = 141 bits (156), Expect = 6e-29 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||||||||| |||||||| | ||| ||||||||| ||||| || |||||| Sbjct 906411 CCTCCGCGAAGACGCAAGACCAAATGTAAGGTGGACTCCTTTTGGATGTTGTAGTCTGAA 906352 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || | | || || || |||||||||||||| || | |||||| ||||| || || Sbjct 906351 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906292 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTC-TTCGCTCTCCA 34657 | || ||||| || ||| ||| | ||| ||| | || ||||| ||| || | Sbjct 906291 ATGCCTTCCTTATC-CTGAATTTTAGCTTTGACGTTTTCGATAGTGTCGGAAGCT-TCAA 906234 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | |||||| |||||||||||||| ||||| || ||||||||||| Sbjct 906233 CTTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906185 Score = 138 bits (152), Expect = 7e-28 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||| | |||| |||||| ||| ||| ||||||||||| || |||||| Sbjct 906183 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906124 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || | | || || || |||||||||||||| || | |||||| ||||| || || Sbjct 906123 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906064 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTC-TTCGCTCTCCA 34657 | || ||||| || ||| ||| | ||| ||| | || ||||| ||| || | Sbjct 906063 ATGCCTTCCTTATC-CTGAATTTTAGCTTTGACGTTTTCGATAGTGTCGGAAGCT-TCAA 906006 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | |||||| |||||||||||||| ||||| || ||||| ||||| Sbjct 906005 CTTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 905957 Score = 136 bits (150), Expect = 2e-27 Identities = 166/224 (74%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || ||||| || | ||| ||||| |||||| ||||| || || || ||||| || || Sbjct 904806 AGGCGCAAGACTAGATGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAAAGAGTACGT 904747 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | ||||||||| ||||| || | |||||| || || || || | |||||| Sbjct 904746 CCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATTCCCTCT 904687 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| ||| | ||| || | ||| |||||| | ||||||||||| || Sbjct 904686 TTGTCCTGGAT-TTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCCACTTCCAGAGT 904628 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 || ||||| || || || ||||||||||| |||||||| |||| Sbjct 904627 GATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCATCTTGA 904584 Score = 134 bits (148), Expect = 9e-27 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||||| ||||| || ||||| ||| |||||||| || ||||| ||| Sbjct 905043 CCTCCTCTTAGACGCAGGACCAAGTGAAGAGTAGACTCTTTTTGAATATTGTAATCAGAA 904984 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || ||||| || ||||| || | |||||||||||| || || Sbjct 904983 AGAGTACGTCCATCTTCCAGCTGTTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGAGGA 904924 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCT-TCGCTCTCCAC 34658 | ||| || |||||| |||||| ||| | | |||||||||| ||| || || Sbjct 904923 ATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTTTCAATTGTGTCTGAAGCT-TCAAC 904865 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || || || || || ||||| ||||| || ||||| Sbjct 904864 CTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTAACAAAGATTTGCAT 904817 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| |||||| | || | |||||| || || ||||| ||||| ||||| || Sbjct 905727 CCACCTCGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGATGTTGTAATCAGAC 905668 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | ||||| ||||||||||| |||||||| | ||| |||||||| || || Sbjct 905667 AGGGTTCTGCCATCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAGGAGGG 905608 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || || |||||| ||||| ||| | | || || || ||| ||| Sbjct 905607 ATGCCTTCTTTGTCTTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGCCTCTACT 905548 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| || || || || || || || ||||| |||||||| |||||| Sbjct 905547 TCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCATG 905500 >seq3620 Length=288302 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || |||||||| || ||||| ||||| || || |||||||| || || || || Sbjct 91858 CCACCCCTAAGACGTAAGACCAAGTGGAGTGTAGATTCTTTTTGAATATTGTAGTCGGAG 91799 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | |||||| |||||||| ||||||||||| ||||| || || Sbjct 91798 AGCGTACGACCATCTTCCAATTGTTTTCCGGCAAAGATTAAACGCTGCTGGTCTGGAGGG 91739 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | |||||| ||||| ||| ||| | || || | || || || | ||| || Sbjct 91738 ATTCCCTCTTTGTCCTGGAT-TTTAGCCTTGACATTTTCGATCGTATCAGAGGCCTCGAC 91680 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || ||||| || || || || || || || |||||||| Sbjct 91679 TTCAAGTGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 91632 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | || || || ||||| ||| || || ||||||||||| || Sbjct 90262 CCACCACGAAGACGAAGTACTAAGTGAAGAGTAGACTCTTTCTGTATGTTATAATCAGAC 90203 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| || || ||||| || || |||||||| |||||||| || Sbjct 90202 AGAGTGCGTCCATCCTCAAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCCGGGGGA 90143 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657 | || ||||||||| |||| || | || ||| | || ||||| |||| || | Sbjct 90142 ATACCTTCCTTGTCTTGGATC-TTAGCCTTTACGTTCTCGATGGTGTCGGACGCT-TCAA 90085 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | ||| || || ||||| || | || || || || || ||||| Sbjct 90084 CTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTGCAT 90036 Score = 96.9 bits (106), Expect = 2e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34488 AAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCG 34547 ||| | ||| |||||||| |||||| ||| || |||||||| ||||| || || || || Sbjct 90482 AAGTCTCAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACG 90423 Query 34548 CTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTC 34607 | ||||| ||||| || || || || ||||||||||| || || || || | || || Sbjct 90422 TCCATCTTCGAGTTGCTTTCCAGCGAAGATTAAACGCTGCTGATCTGGAGGAATACCTTC 90363 Query 34608 CTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGG 34666 ||| ||| ||| ||| | || || | || ||||| ||| || || | || Sbjct 90362 CTTATCTTGGAT-TTTGGCCTTGACATTCTCGATCGTGTCGGATGCCTCAACCTCAAGGG 90304 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || || ||||| || || || || || |||||||| Sbjct 90303 TGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314710758712496