Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3545 131 2e-25 >seq3545 Length=1895843 Score = 131 bits (144), Expect = 2e-25 Identities = 176/245 (72%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 ||||| ||||||||| |||||||| | ||| || |||||||| ||||| || | Sbjct 330046 ACATGGGCGATCATGATGGTGAGCAGCGAGTAGGAGGCGATGTTGAATGGCACACCAAGG 330105 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 ||||| || || | || |||||| || || ||||| ||||| || | ||||||||| Sbjct 330106 CCCATATCGCCGGCTCTTTGATAAAGATGACAGGAAAGCTCGCCGTCGTAGACGTAGAAC 330165 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 || ||| | |||||| || ||||| ||||| || | ||| ||||||||||||| Sbjct 330166 TGAGCGAGCGAGTGGCAGGGCGGGAGGGCCATTTTCGGAATGTCCACCGGGTTCCACGCG 330225 Query 6797 CACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGC 6856 | ||| | || | ||||| || ||||| ||||| |||||||||||| ||| Sbjct 330226 CTCATTATTATTCGCCTGTCGTCCGGGTTGTTCTTCACCTTGTCGATCACGTCGGTAAGC 330285 Query 6857 TGGTC 6861 ||||| Sbjct 330286 TGGTC 330290 Score = 131 bits (144), Expect = 2e-25 Identities = 176/245 (72%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 34484 GACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTG 34543 |||||||| |||||||||||| ||||| ||||| || ||||| | || | Sbjct 330290 GACCAGCTTACCGACGTGATCGACAAGGTGAAGAACAACCCGGACGACAGGCGAATAATA 330231 Query 34544 ATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTC 34603 ||| |||||||||||||| ||| | || ||||| ||||| || |||||| | ||| Sbjct 330230 ATGAGCGCGTGGAACCCGGTGGACATTCCGAAAATGGCCCTCCCGCCCTGCCACTCGCTC 330171 Query 34604 TGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGAC 34663 || ||||||||| | || ||||| ||||| || || |||||| || | || || Sbjct 330170 GCTCAGTTCTACGTCTACGACGGCGAGCTTTCCTGTCATCTTTATCAAAGAGCCGGCGAT 330111 Query 34664 ATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCT 34723 ||||| | || ||||| |||||||| || ||| | |||||||| ||||||||| Sbjct 330110 ATGGGCCTTGGTGTGCCATTCAACATCGCCTCCTACTCGCTGCTCACCATCATGATCGCC 330051 Query 34724 CATGT 34728 ||||| Sbjct 330050 CATGT 330046 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 |||| || |||||||| |||||||| || ||||| |||||||| | ||||| ||||| Sbjct 330402 TACTTGGCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATCGCCTTCCTCG 330461 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 ||| | || || | |||| || || |||| ||| ||| ||||||||||| ||| Sbjct 330462 CGATCCTGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTCCCAGATTTTC 330521 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCC 7078 || || || || |||||||||| ||| || | || | | |||||| | || ||| Sbjct 330522 ACGCCTTTGGCGGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCAGAACAACTCT 330581 Query 7079 TCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAA 7125 || | || || |||| | || || ||||| || ||||| || || Sbjct 330582 TCTGCAACAGCCCGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 330628 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34220 TTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGG 34279 || || ||||| || ||||| || || | |||| || || | || ||| || | ||| Sbjct 330628 TTACCACTGCTCACTACGAAGCGAGTATTCTGGCGGGCTGTTGCAGAAGAGTTGTTCTGG 330569 Query 34280 TTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGAC 34339 ||| | | || | || ||| |||||||||| || || || ||||| ||||||||| Sbjct 330568 TTCATCCGAGGCTCGACTAACGCCAAGGAGCTTTCCGCCAAAGGCGTGAAAATCTGGGAC 330509 Query 34340 GCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGAC 34399 || ||| ||| |||| || || |||| | || || | ||| ||||| ||||| Sbjct 330508 GCCAACGCGTCCAGAGAATTCCTCGACACCTGCGGCTTTCAGGATCGCGAGGAAGGCGAT 330449 Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 | |||||||| ||||| || |||||||| |||||||| || |||| Sbjct 330448 CTCGGCCCGGTTTACGGCTTTCAGTGGAGGCACTTTGGCGCCAAGTA 330402 Score = 93.3 bits (102), Expect = 4e-14 Identities = 170/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 34478 GGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGG 34537 |||| |||||| ||||| | ||||| ||| | || || || || ||| || | Sbjct 1750136 GGAGTCGACCAGTTGCAGGATGTGATTAACAAAATAAAAAACAAACCGGACGACCGACGA 1750195 Query 34538 ATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCAC 34597 || | |||||||| ||||| || ||| | ||| | ||||| || || ||||| || Sbjct 1750196 ATAATAATGTGCGCCTGGAATCCAGTAGATATTCCTTTAATGGCTCTTCCTCCGTGTCAT 1750255 Query 34598 ACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCG 34657 | || ||||| | || || |||| ||||| || || ||||| |||||| || Sbjct 1750256 GCTCTGGTTCAATTTTGTGTAGCTGATGGAGAGCTATCTTGTCAGCTGTATCAAAGAAGT 1750315 Query 34658 GGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATG 34717 | || ||||| | || || || ||||||||||| ||| || ||||||| | |||| Sbjct 1750316 GCTGATATGGGACTTGGAGTCCCATTCAACATTGCCTCTTATTCTTTGCTCACATGCATG 1750375 Query 34718 ATCGCTCAT 34726 || || ||| Sbjct 1750376 ATTGCCCAT 1750384 Score = 93.3 bits (102), Expect = 4e-14 Identities = 170/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 6619 ATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCC 6678 ||| || |||||| | ||||||| || ||| ||||||||||| || || || | || Sbjct 1750384 ATGGGCAATCATGCATGTGAGCAAAGAATAAGAGGCAATGTTGAATGGGACTCCAAGTCC 1750325 Query 6679 CATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTG 6738 ||| || | || |||||| ||||| || || ||||| |||| || || | ||||| Sbjct 1750324 CATATCAGCACTTCTTTGATACAGCTGACAAGATAGCTCTCCATCAGCTACACAAAATTG 1750265 Query 6739 GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCA 6798 || | || ||||| || || ||||| | ||| | ||| || ||||| ||||| Sbjct 1750264 AACCAGAGCATGACACGGAGGAAGAGCCATTAAAGGAATATCTACTGGATTCCAGGCGCA 1750205 Query 6799 CATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTG 6858 ||| | || | || ||| || || || || | ||| ||||| | ||||| ||| Sbjct 1750204 CATTATTATTCGTCGGTCGTCCGGTTTGTTTTTTATTTTGTTAATCACATCCTGCAACTG 1750145 Query 6859 GTCCGCTCC 6867 ||| |||| Sbjct 1750144 GTCGACTCC 1750136 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 34220 TTTCCGCTGCTGACGACGAA--ACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGT 34277 ||||| |||||||| || || |||| | ||| | |||||||||||| |||| | Sbjct 1749806 TTTCCTCTGCTGACAACCAAGAACGTTCTT--TGGCGTGCTGTGGTCGAGGAGTTGCTCT 1749863 Query 34278 GGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGG 34337 ||||| | | ||| |||| ||| | || ||||| | | || || || |||||| Sbjct 1749864 GGTTCATAAAGGGATCCACTAACGCAAAAGAGCTTGCCGACAAAGGCGTAAAAATCTGGA 1749923 Query 34338 ACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCG 34397 |||| | | || || || ||| |||| | |||||| | | | || ||||||| Sbjct 1749924 ACGCCAATAGTTCGCGTGAATTTTTGGATTCCTGCGGGTTCACCGATAGAGAAGAGGGCG 1749983 Query 34398 ACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440 |||||||||| || || || ||||||||||| || || || || Sbjct 1749984 ACTTGGGCCCTGTATATGGCTTCCAGTGGAGGCATTTCGGAGC 1750026 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 6905 GCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGAT 6964 || || || || ||||||||||| || || || ||||||||||||||||| || | | Sbjct 1750026 GCTCCGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTATCG 1749967 Query 6965 GGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024 | |||||| | |||| ||| || || || | | |||| |||||| || || || Sbjct 1749966 GTGAACCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACGCCT 1749907 Query 7025 CGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACC 7084 | | ||||| || | ||| |||| ||| | | |||||| |||| |||||||||| Sbjct 1749906 TTGTCGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCGACC 1749847 Query 7085 ACGCCCTTCCAGTACACACGT--TTCGTCGTCAGCAGCGGAAA 7125 || | ||| | |||| || || |||||||| ||||| Sbjct 1749846 ACAGCACGCCA--AAGAACGTTCTTGGTTGTCAGCAGAGGAAA 1749806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448234876688640