Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq2005 95.1 9e-15 seq3620 91.5 1e-13 >seq2005 Length=1592806 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--AGCA 27847 |||||||||||||| |||||||| ||||| ||| || || | || || ||| | || Sbjct 905273 ATGCAAATTTTTGTAAAAACTCTGACTGGTAAAACCATCACTCTGGAGGTTGAAGCATCA 905332 Query 27848 CCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || || | ||| || ||| ||||| |||||||||||| | || || | Sbjct 905333 GATACCATTGAAAAT--GTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGATC 905390 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | || || | ||||| || ||||| ||| |||| || | | | | | |||| ||||||| Sbjct 905391 AACAGCGTCTGATTTTCGCAGGAAAGCAACTGGAAGATGGAAGAACCCTGTCTGATTACA 905450 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 ||||||||||||| ||| | ||| | ||| | ||| | || || ||| Sbjct 905451 ACATCCAAAAAGAATCAACTCTCCATCTTGTTCTTCGTCTTCGAGGAGGC 905500 >seq3620 Length=288302 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| || || |||||||| ||| ||||| | || |||||| | Sbjct 89580 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89639 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| | ||| ||||| || || |||||||||||| |||| || | Sbjct 89640 GATACGATTGAGAAT--GTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCCCCAGATC 89697 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || | |||||||| || || ||| | || || | ||||| ||||| || |||| Sbjct 89698 AGCAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACA 89757 Query 27968 ACATCCAAAAAGA 27980 |||| ||||| || Sbjct 89758 ACATTCAAAAGGA 89770 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || || || || || || ||| || ||| |||| ||||| || Sbjct 89808 ATGCAGATCTTCGTTAAGACACTCACGGGTAAAACCATCACACTTGAAGTCGAGGCTTCC 89867 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| | ||| || || ||||| |||||||| || | || || | Sbjct 89868 GACACGATCGAAAAT--GTGAAGGCTAAAATTCAGGACAAAGAGGGAATCCCACCAGACC 89925 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| || || || ||||||||||| || || | |||| ||||| || || | Sbjct 89926 AGCAGAGGTTGATCTTCGCTGGAAAACAATTAGAGGATGGGCGCACATTGTCAGACTATA 89985 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||| |||||||| ||| |||||||||| ||||| | ||||| || Sbjct 89986 ACATACAAAAAGAATCCACGCTGCATTTGGTATTGCGACTTCGTGGAGG 90034 Score = 82.4 bits (90), Expect = 5e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 || || |||||| |||| || ||||| || ||||| || || ||||| ||| | || Sbjct 90357 GATAAGGAAGGTATTCCTCCAGATCAGCAGCGTTTAATCTTCGCTGGAAAGCAACTCGAA 90416 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||| | |||||||||||||||| || |||||| |||| | |||||||| ||| Sbjct 90417 GATGGACGTACTCTGTCCGATTACAACATTCAGAAAGAGTCCACTCTTCATTTGGTCTTG 90476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355841096297424