Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq3545 134 1e-26 >seq3545 Length=1895843 Score = 134 bits (148), Expect = 1e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 ||||||||||||||||||| || || || || |||| ||| |||||||| || | || Sbjct 1750022 CGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTATCGGTGA 1749963 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 | || | |||||||| || | |||| ||||||| |||||| ||||| || || | Sbjct 1749962 ACCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACGCCTTTGT 1749903 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30194 ||| |||||||| | ||| ||||| || | | |||||| |||| |||||| || || | Sbjct 1749902 CGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCGACCACAG 1749843 Query 30195 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30231 | ||||| || ||||||| || || || ||||| Sbjct 1749842 CACGCCAAAGAACGTTCTTGGTTGTCAGCAGAGGAAA 1749806 Score = 122 bits (134), Expect = 7e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || ||||||||||| || ||||| ||||| || || || || || || | | || ||| Sbjct 330414 AAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATCGCCTTCCTCGCGATCCTGAAAG 330473 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || | |||| | || |||||||| |||||||||||||||| || || || || || Sbjct 330474 CCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTCCCAGATTTTCACGCCTTTGGCG 330533 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196 || ||||| |||| ||| || || |||| || |||||| | || ||| || | || ||| Sbjct 330534 GAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCAGAACAACTCTTCTGCAACAGCC 330593 Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30231 ||| || || | ||| || ||||| || || || Sbjct 330594 CGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 330628 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29726 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCC 29785 || || |||||| | ||||| | ||| || ||| ||||| || || || || || ||| Sbjct 1750383 TGGGCAATCATGCATGTGAGCAAAGAATAAGAGGCAATGTTGAATGGGACTCCAAGTCCC 1750324 Query 29786 ATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTC-GCTCACGTAAAACTG 29844 || || | || || || ||||| || || |||||||| || ||| || |||| || Sbjct 1750323 ATATCAGCACTTCTTTGATACAGCTGACAAGATAGCTCTCCATCAGCT-ACACAAAATTG 1750265 Query 29845 ACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCACA 29904 | || ||||| ||||||||||| ||||| | | | ||| || |||||||| || Sbjct 1750264 AACCAGAGCATGACACGGAGGAAGAGCCATTAAAGGAATATCTACTGGATTCCAGGCGCA 1750205 Query 29905 CACGATGATGCGCCTGTCTTCTGGGTTGTT 29934 || || || || | ||| || || ||||| Sbjct 1750204 CATTATTATTCGTCGGTCGTCCGGTTTGTT 1750175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406138885040032