Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq3545 138 8e-28 >seq3545 Length=1895843 Score = 138 bits (152), Expect = 8e-28 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 27505 GCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 27564 ||||||||||||||||| ||||| || || || || |||| ||| |||||||| || | Sbjct 1750026 GCTCCGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTATCG 1749967 Query 27565 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 27624 ||| || | |||||||| || | |||| ||||||| |||||| ||||| || Sbjct 1749966 GTGAACCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACGCCT 1749907 Query 27625 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 27684 || |||| |||||||| | ||| ||||| || | | |||||| |||| |||||| || Sbjct 1749906 TTGTCGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCCTCGACC 1749847 Query 27685 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725 || || ||||| || ||||||| || || || ||||| Sbjct 1749846 ACAGCACGCCAAAGAACGTTCTTGGTTGTCAGCAGAGGAAA 1749806 Score = 125 bits (138), Expect = 5e-24 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 |||||| ||||| || || || |||||||| || || ||||| ||||| || || || Sbjct 330392 CATGTCGACGTACTTGGCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATC 330451 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 || || || | | || ||||| | |||| | || |||||||| |||||||||| Sbjct 330452 GCCTTCCTCGCGATCCTGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTC 330511 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 27668 |||||| || || || || |||| ||||| |||| ||| || || |||| || |||||| Sbjct 330512 CCAGATTTTCACGCCTTTGGCGGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCA 330571 Query 27669 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725 | || ||| || | || ||| ||| || || | ||| || ||||| || || || Sbjct 330572 GAACAACTCTTCTGCAACAGCCCGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 330628 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27220 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 27279 || || |||||| | ||||| | ||| || ||| ||||| || || || || || ||| Sbjct 1750383 TGGGCAATCATGCATGTGAGCAAAGAATAAGAGGCAATGTTGAATGGGACTCCAAGTCCC 1750324 Query 27280 ATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGA 27339 || || | || || || |||||||| || ||||||||||| ||| |||| ||| Sbjct 1750323 ATATCAGCACTTCTTTGATACAGCTGACAAGATAGCTCTCCATCAGCTACACAAAATTGA 1750264 Query 27340 CATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCAC 27399 | || || ||||||||||||||||| | | ||| || |||||||||||| Sbjct 1750263 ACCAGAGCATGACACGGAGGAAGAGCCATTAAAGGAATATCTACTGGATTCCAGGCGCAC 1750204 Query 27400 ACGATGATGCGCCTGTCTTCTGGGTTGTT 27428 | || || || | ||| || || ||||| Sbjct 1750203 ATTATTATTCGTCGGTCGTCCGGTTTGTT 1750175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369485079451472