Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq4696 203 5e-47 seq1332 136 5e-27 >seq4696 Length=9412112 Score = 203 bits (224), Expect = 5e-47 Identities = 320/456 (70%), Gaps = 2/456 (0%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 |||||||| ||||||||||||||| |||||||| ||||||| ||| ||||| || | Sbjct 481928 TCAAATTCTTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACACATTAAACTC 481987 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 || | || || ||||| ||||| || | || || ||||||| |||| || Sbjct 481988 CATTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAAGCATAGAAA 482047 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 || |||| | ||| | |||||| || ||||| |||||||| ||||||||||| || | Sbjct 482048 AGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAGAAATTCGAAG 482107 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 || |||| |||||| ||||| | ||| || || | ||||||||| || || || || Sbjct 482108 ATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACCT 482167 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 ||||| | || | || |||||||| || ||||| | ||| |||| | ||| |||||| Sbjct 482168 TGATCAACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGAT 482227 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 || ||||| |||||||| | | ||| | || | ||| | || | || Sbjct 482228 ACGCCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAACCA 482287 Query 78285 ATTCCTCCTGCCATCTTAGAT-ATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTC 78343 || || || | || || | | | || ||| || | |||| |||||| || || || || Sbjct 482288 ATGCCACCAG-CAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATAAATTCCTTC 482346 Query 78344 TATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 |||||||| || |||| ||||||| ||||| || Sbjct 482347 AATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 482382 Score = 192 bits (212), Expect = 8e-44 Identities = 313/448 (70%), Gaps = 7/448 (2%) Strand=Plus/Plus Query 76896 GCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATT 76955 ||||| || | ||| | |||||| ||||| ||||| || |||| ||| || |||||| Sbjct 480659 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 480718 Query 76956 TTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCT 77015 || | |||||||||||| | ||| ||||| | |||||| | | || || | ||||| Sbjct 480719 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCC 480778 Query 77016 GGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCA 77072 |||| ||| | || |||| ||||| | || || ||| |||||| || || Sbjct 480779 GGAATCCTTGCAAGGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 480838 Query 77073 TCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAAT 77132 || | ||||| | ||| ||||| ||| || | | | ||||||||| || | ||| ||| Sbjct 480839 TCGTCCCACAGATCCCTGTCTGTCAAATCTTTCAACAAATGAGGATTGACGACTTGGAAT 480898 Query 77133 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 77192 |||||||| | || | | |||||||| || || || || || || | ||||| ||| Sbjct 480899 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 480958 Query 77193 TTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTG 77252 || ||||||||||| || || ||||| |||||||| || || | || ||| ||| | Sbjct 480959 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 481018 Query 77253 AGACCATGTGTTCTG--ATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTA 77310 | ||| ||||||| |||||| |||| || |||| ||||| || | ||| Sbjct 481019 ACGCCA--TGTTCTGCAATTTTAGCTTTCAGGGCAGTCCAGTCCCAGAGGCTGGTTGGTG 481076 Query 77311 CAACATCCCAAAGATCGTATTGTAGAAT 77338 |||| ||| | |||||||||| ||| Sbjct 481077 TTACATTCCACATGTCGTATTGTAAAAT 481104 >seq1332 Length=421543 Score = 136 bits (150), Expect = 5e-27 Identities = 226/327 (69%), Gaps = 6/327 (2%) Strand=Plus/Minus Query 77524 TACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAA 77583 |||||| ||||| || | |||||| ||| ||||| | ||||||| ||| | Sbjct 276613 TACCAACTGGTCTGTGCATTAAATTGGATTTTTATGCTTCGATGAGCGGATAATGATTCA 276554 Query 77584 TGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAA 77643 || |||||||||| | ||| || |||| |||||| || || || | ||| | || Sbjct 276553 GATCAATAATTTTATCTAAATTCTTAGCAACAGTTTTAACAACTTCTTTCAATTTTAAAA 276494 Query 77644 AATCAAA------TCTTCCATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTAC 77697 ||| | | || || | ||||||||| || | ||| || ||||||| ||||| Sbjct 276493 AATTGTAGTACTGTGTTTCAACATCAACAAACATATTAACAGCAATGGATGCTAAATTAC 276434 Query 77698 AAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATT 77757 | |||||||| ||||| | | |||||||| || || || |||| |||||| | || Sbjct 276433 ATACTGCTACTTCATTTGGAGAAGAGTATTGTATAATTTCAGTGCATAAATTACTGCTTT 276374 Query 77758 TGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAA 77817 | ||||| || ||||||||||| || || |||||| | || ||||| || ||| Sbjct 276373 TAATAGTTCCAAGATTTTGTTGATTTGATTTAAGATTGCAGGGATCTTTATAGAGCATAT 276314 Query 77818 ACGGAGTCCCGGTTTCAATCTGTGATT 77844 | ||||| || ||||||| |||| || Sbjct 276313 AAGGAGTTCCAGTTTCAACTTGTGCTT 276287 Score = 136 bits (150), Expect = 5e-27 Identities = 134/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 || || || ||||||| ||| | || |||| ||||||| | | | | ||| |||||| Sbjct 277243 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277184 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 || || |||||||| ||||| || | | ||||||||||||||| || || || ||| Sbjct 277183 ACAATCATGAATTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTCC 277124 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGC 77233 || ||||||||||||||||| || ||||| |||||||| || ||||| ||||| Sbjct 277123 ACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTCGGCATTGGTGC 277071 Score = 102 bits (112), Expect = 1e-16 Identities = 192/277 (69%), Gaps = 4/277 (1%) Strand=Plus/Minus Query 78378 CTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAAC 78437 || |||||||| || || | ||| | |||| | | | ||| ||||||||||| || || Sbjct 275510 CTGGACATTTGTTGGTGTATAGTACATGCAAAAGAAAGTGTAGGAGATGCATGTGTGAAG 275451 Query 78438 CATTTTTCAGAAAGTAGA-TTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAAT 78496 | ||||||| ||| | || ||||| || || || ||| | ||| || ||||| Sbjct 275450 TAACGTTCAGAA-GTATAATTATATGTCTCTATGACTTTTTCAAGATCCTCTTTATGAAC 275392 Query 78497 TCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATT-ATTTATTT 78555 |||| || || | ||| | ||||| || |||| ||||| ||| | ||| || Sbjct 275391 AGCTACTGCAACTCTCATAAGCATATCTTGTGGTCACTCAACAA-CTTGTCCATTAATCC 275333 Query 78556 TCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCT 78615 | || ||||| ||| ||||| |||||||| ||||||||||| | ||| ||| | | Sbjct 275332 TGAATAAGTAACTTTTCTCCAAGGTTTTAAATCCAAAATAGTTAAAGACAAAATCTTTGT 275273 Query 78616 CGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652 | || || ||||||||||| ||||||| | ||| Sbjct 275272 CATAGTCTATGGCAGAATTTAGTCTATCTTTATGTTT 275236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694626147335680