Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2005 111 1e-19 seq3620 104 2e-17 >seq2005 Length=1592806 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| || |||| ||| | ||| |||||| || ||||| ||||| || Sbjct 906411 CCTCCGCGAAGACGCAAGACCAAATGTAAGGTGGACTCCTTTTGGATGTTGTAGTCTGAA 906352 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || ||||| || ||||| || || || ||||| ||||| | || Sbjct 906351 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906292 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||| ||| ||| |||| |||| ||| | | ||||||| | || || Sbjct 906291 ATGCCTTCCTTATCC-TGAATTTTAGCTTTGACGTTTTCGATAGTGTCGGAAGCTTCAAC 906233 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||||| |||||||| || | || || |||||||||||||| Sbjct 906232 TTCTAAGGTTATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906185 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || || ||||||||||||||| ||||| || Sbjct 905955 CCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAA 905896 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| ||| |||| || | || || || || || || || ||||| ||||| | ||| Sbjct 905895 AGGGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGAGGA 905836 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | || |||||| ||| |||| |||| ||| | | |||||| | ||| || Sbjct 905835 ATTCCTTCTTTGTCC-TGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCTAC 905777 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || ||||| || || |||||||| ||||| Sbjct 905776 TTCCAGAGTAATGGTCTTGCCAGTCAGAGTTTTGACGAAAATTTGCAT 905729 >seq3620 Length=288302 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||| ||||| |||||||| || || || ||||| | || || |||||||| |||||||| Sbjct 90227 CTCTTTCTGTATGTTATAATCAGACAGAGTGCGTCCATCCTCAAGCTGCTTTCCGGCGAA 90168 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| ||||| ||||||| ||||| | |||||||| ||| || ||| | Sbjct 90167 AATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTT 90108 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | |||||| || || || || | || || || ||||| ||||| |||||||| Sbjct 90107 CTCGATGGTGTCGGACGCTTCAACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTAC 90048 Query 41851 GAAAATCTGCAT 41862 ||| || ||||| Sbjct 90047 GAAGATTTGCAT 90036 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 || || ||||| || |||||||| || || || | || |||||||||||||| ||||| Sbjct 89314 TCTTTTTGAATATTGTAGTCGGACAGAGTACGTCCATCTTCGAGCTGCTTGCCAGCGAAG 89255 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 |||| | ||| ||||| | ||||| || ||||| || ||| || ||| | | Sbjct 89254 ATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCTTGGATCTTGGCCTTGACATTC 89195 Query 41792 GACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | ||||||| | ||| ||||| | || || || || || ||||| || || ||| Sbjct 89194 TCGATAGTGTCGGAAGCCTCAACCTCGAGGGTGATGGTCTTCCCAGTCAGGGTTTTCACG 89135 Query 41852 AAAATCTGCATGTT 41865 |||||||||||||| Sbjct 89134 AAAATCTGCATGTT 89121 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || || |||| |||||||||| || || || ||||||||||| || Sbjct 90034 CCTCCACGAAGTCGCAATACCAAATGCAGCGTGGATTCTTTTTGTATGTTATAGTCTGAC 89975 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || || | || || || ||||| |||| | ||| ||||| | || Sbjct 89974 AATGTGCGCCCATCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGG 89915 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | | ||| |||||| ||| |||| | ||||| | |||||| | ||| || Sbjct 89914 ATTCCCTCTTTGTCC-TGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAAGCCTCGAC 89856 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||||||||| || ||||| ||||| |||||||| Sbjct 89855 TTCAAGTGTGATGGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCAT 89808 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 || || ||||| || |||||||| || || || | || |||||||||||||| ||||| Sbjct 89542 TCTTTTTGAATATTGTAGTCGGACAGAGTACGTCCATCTTCGAGCTGCTTGCCAGCGAAG 89483 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 |||| | ||| ||||| | ||||| || ||||| || ||| || ||| | | Sbjct 89482 ATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCTTGGATCTTGGTCTTGACATTC 89423 Query 41792 GACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | |||||| | ||| ||||| | || || || || || |||| ||||| ||| Sbjct 89422 TCGATCGTGTCGGATGCCTCAACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACG 89363 Query 41852 AAAATCTGCAT 41862 || |||||||| Sbjct 89362 AAGATCTGCAT 89352 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| ||| || ||| ||| ||||||||||| || ||||| || || || | || Sbjct 90475 AAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGTCCATCT 90416 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 ||||| ||||| || ||||| || | ||||| || || | |||| | ||||| || Sbjct 90415 TCGAGTTGCTTTCCAGCGAAGATTAAACGCTGCTGATCTGGAGGAATACCTTCCTTATCT 90356 Query 41771 ATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 |||||| ||| | | | |||||| | ||| ||||| | || || || Sbjct 90355 TGGATTTTGGCCTTGACATTCTCGATCGTGTCGGATGCCTCAACCTCAAGGGTGATGGTC 90296 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || |||| ||||| ||||| |||||||| Sbjct 90295 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462275614534400