Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq236 129 4e-25 >seq236 Length=27037145 Score = 129 bits (142), Expect = 4e-25 Identities = 186/260 (72%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 101749 ATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCAC 101808 ||| || | ||| ||||||||||| || | | |||||| |||||||| ||||| || Sbjct 26891217 ATTCGTTATATGGGCAATCATGCATGTGAGCAAAGAATAAGAGGCAATGTTGAATGGGAC 26891158 Query 101809 TCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGAC 101868 ||| | ||||||||||| |||||||||||| ||||| || | || ||||||| || Sbjct 26891157 TCCAAGTCCCATATCAGCACTTCTTTGATACAGCTGACAAGATAACTCTCCATCAGCTAC 26891098 Query 101869 ATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATT 101928 | ||||||| | |||||||||| || | ||||| ||||||| ||| ||| Sbjct 26891097 ACAAAATTGCACCAGAGCATGACAAGGAGGAAGAGCCATTATAGGAATATCTACTGGATT 26891038 Query 101929 CCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTG-TTTTTATAGTATCAATCAACT 101987 ||| || ||||||| || | || || | |||||| ||||||| | | ||||| | Sbjct 26891037 CCAGGCGCACATTATTATTCGTCGGTC-ATCCGGTTTGTTTTTTATTTTGTTAATCACAT 26890979 Query 101988 GTTTTAATTGGTCAACTCCT 102007 | || ||||| |||||| Sbjct 26890978 CCTGCAACTGGTCGACTCCT 26890959 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA 102103 || || || |||||||||||||| || || || || || ||||| ||||| || | || Sbjct 25468375 GCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATCGCCTTCCTCGCGATCC 25468434 Query 102104 TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCA 102163 | ||| || | || | ||| ||| || | || || ||||| || | |||||| Sbjct 25468435 TGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTCCCAGATTTTCACGCCT 25468494 Query 102164 GCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACA 102223 || || ||||| ||| || ||| || |||| ||| ||||| |||| ||||| | Sbjct 25468495 TTGGCCGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCAGAACAACTCTTCTGCC 25468554 Query 102224 ACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 || ||| ||| ||||||| ||| ||||| | ||||| || Sbjct 25468555 ACGGCTCGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 25468595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361224352036598