Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq236 129 4e-25
>seq236
Length=27037145
Score = 129 bits (142), Expect = 4e-25
Identities = 186/260 (72%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 101749 ATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCAC 101808
||| || | ||| ||||||||||| || | | |||||| |||||||| ||||| ||
Sbjct 26891217 ATTCGTTATATGGGCAATCATGCATGTGAGCAAAGAATAAGAGGCAATGTTGAATGGGAC 26891158
Query 101809 TCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGAC 101868
||| | ||||||||||| |||||||||||| ||||| || | || ||||||| ||
Sbjct 26891157 TCCAAGTCCCATATCAGCACTTCTTTGATACAGCTGACAAGATAACTCTCCATCAGCTAC 26891098
Query 101869 ATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATT 101928
| ||||||| | |||||||||| || | ||||| ||||||| ||| |||
Sbjct 26891097 ACAAAATTGCACCAGAGCATGACAAGGAGGAAGAGCCATTATAGGAATATCTACTGGATT 26891038
Query 101929 CCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTG-TTTTTATAGTATCAATCAACT 101987
||| || ||||||| || | || || | |||||| ||||||| | | ||||| |
Sbjct 26891037 CCAGGCGCACATTATTATTCGTCGGTC-ATCCGGTTTGTTTTTTATTTTGTTAATCACAT 26890979
Query 101988 GTTTTAATTGGTCAACTCCT 102007
| || ||||| ||||||
Sbjct 26890978 CCTGCAACTGGTCGACTCCT 26890959
Score = 96.9 bits (106), Expect = 3e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA 102103
|| || || |||||||||||||| || || || || || ||||| ||||| || | ||
Sbjct 25468375 GCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATCGCCTTCCTCGCGATCC 25468434
Query 102104 TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCA 102163
| ||| || | || | ||| ||| || | || || ||||| || | ||||||
Sbjct 25468435 TGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTCCCAGATTTTCACGCCT 25468494
Query 102164 GCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACA 102223
|| || ||||| ||| || ||| || |||| ||| ||||| |||| ||||| |
Sbjct 25468495 TTGGCCGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCAGAACAACTCTTCTGCC 25468554
Query 102224 ACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264
|| ||| ||| ||||||| ||| ||||| | ||||| ||
Sbjct 25468555 ACGGCTCGCCAGAATACTCGCTTCGTAGTGAGCAGTGGTAA 25468595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361224352036598
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |